| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5079 |
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| Symbol | |
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| ID | 7974198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5391487 |
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| End bp | 5393445 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795673 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_002946947 |
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| Protein GI | 239818037 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC CCGCCGCTGC TGCCACTGCC GCCACCGCGC CCCACGAGGC GAACGCCCAC
GCCAACCAGT TCGCGCTTCT CAGGCAGCGG CGCTTCGCGC CCTTCTTCTG GACCCAGTTC
GCGGGCGCGG CCAACGACAA CCTCTTCAAG TTCGCCTTCA CCGTGATGGT GACCTACCAG
CTCCAGCTGA GCTGGATGCC GCCGGCCATG GCGGGGCTGG CCATCGGCGC GCTGTTCATC
CTGCCGTTCC TGCTGTTCTC GGCCACGGCG GGGCAGCTCA CCGACAAGTT CGACAAGACG
AAGATGATCC GCTTCGTCAA GAACCTCGAG ATCGCGATCA TGCTGCTCGC GGCCTGGGGC
TTCGTGCGCG CCGATGCGGT GGTGCTGCTG GGCTGCGTGT TCCTCATGGG CCTGCATTCC
ACGCTGTTCG GGCCGGTCAA GTTTGCCTAC CTGCCGCAGG TGCTCGACGC GCGCGAGCTC
ACGGGCGGCA ACGGCATGGT CGAGATGGGC ACCTTCGTCG CCATCCTGCT CGGGCAGGTG
GCGGGCGGGC TGCTGGTGGC GCTGCCGCAG GTGGGCCACG CCACGGTGGC GGTGGCCTGC
GTGCTGCTGG CACTGGTCGG GCGCGGCGTG GCGCAGGCCA TTCCGCGGGC GCCCGCCACC
GACCCGGGCC TGGTGATCAA CTGGAACCCA TTCAGCGAGA CCTGGCGCAA CCTCAAGCTC
GCGCACGGCA ACATCGTGGT GTTCCGCTCG CTCCTGGGCA TCTCGTGGAT GTGGTTCTTC
GGCGCGGTGT TCCTGAGCCA GTTCCCCAGC TTCGCGAAGG AGGTGCTGCA CGGCGACGAG
CAGGTGGCCT CGCTGCTGCT GGTGGTGTTC TCGGTGGGCA TCGGCGCGGG CTCGCTGCTG
TGCGAGACGC TGAGCCGGCG GCAGGTGGAG ATCGGCCTGG TGCCGCTGGG CGCCATTGGC
ATGAGCGTGT TCGCCATCGA CCTGTACTTT GCGTCGCGCG CGCTGCCGCC GTCCGCCGGC
ATGGGGCTGG GCGCCTTCAT GGGCCAGGCC GCGCACTGGC GCGTGATGGC CGACCTGGCG
CTGCTGTCGC TCTTCGCGGG GCTCTACAGC GTGCCGATGT ACGCGCTGAT CCAGCTGCGC
AGCCAGCCCA CGCACCGCGC ACGCATCATC GCGGCCAACA ACATCCTCAA TGCGCTGTTC
ATGATCGGCA GCTCGGTGAT CGCGGGTGCC TTGCTCGGCG CCGGCTTCAC GATTCCCCAG
ATCTTCCTGT TCACGGGCAT TGCCAACGCG CTGGTGGCGT TCTACATCTT CATGCTGGTG
CCGGAATACC TGCTGCGCTT CATCGCGTGG ATGCTGTCGC ACTTCGTCTA CCGCTTCGAG
ATCAAGGGCG ACGAGCACAT TCCCACCGAA GGCGCCGCGG TGCTGGTGTG CAACCACGTG
AGCTTCATCG ACGCCATCTT GCTGATGGCC GCGAGCCCGC GCCCGATCCG CTTCATCATG
GACCACCGGA TCTTCAAGGT GCCGGTGCTC GGCTGGCTGT TCAAGCTGGC CAAGGCGATT
CCGATCGCGC CGCAGAAGGA AGACCCGGCG GCCTACGAAG CGGCCTTTGC CAGGGCGCTG
GGCGTGCTGC GCGAAGGCGA CCTGCTCGCC ATCTTTCCCG AGGGTGCGAT CACGCGCGAC
GGCCAGCTGC AGCCCTTCAA GGGCGGCGTG ATGAAGATCA TCGAAAGCGC GCGCGCCGAA
GGCATCGAGC CGCCGGTGAT CCCGATGGCG CTGACCAACC TCTGGGGCTC GTACTTCAGC
CGCATCGAGC TGCGCGGCGG CGAGAACGTG GCCATGGCCA AGCCCTTCCG CCGCGGCTTC
TTCAGCCGCG TGGGGCTCAA CGTCGGCCAT GCCGTGCCGC CGGTCGAGGT GCGGCCCGAG
GCGCTGCAGC AGCGCGTGAG CGGTTTGCTG GCCGCCTGA
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| Protein sequence | MTTPAAAATA ATAPHEANAH ANQFALLRQR RFAPFFWTQF AGAANDNLFK FAFTVMVTYQ
LQLSWMPPAM AGLAIGALFI LPFLLFSATA GQLTDKFDKT KMIRFVKNLE IAIMLLAAWG
FVRADAVVLL GCVFLMGLHS TLFGPVKFAY LPQVLDAREL TGGNGMVEMG TFVAILLGQV
AGGLLVALPQ VGHATVAVAC VLLALVGRGV AQAIPRAPAT DPGLVINWNP FSETWRNLKL
AHGNIVVFRS LLGISWMWFF GAVFLSQFPS FAKEVLHGDE QVASLLLVVF SVGIGAGSLL
CETLSRRQVE IGLVPLGAIG MSVFAIDLYF ASRALPPSAG MGLGAFMGQA AHWRVMADLA
LLSLFAGLYS VPMYALIQLR SQPTHRARII AANNILNALF MIGSSVIAGA LLGAGFTIPQ
IFLFTGIANA LVAFYIFMLV PEYLLRFIAW MLSHFVYRFE IKGDEHIPTE GAAVLVCNHV
SFIDAILLMA ASPRPIRFIM DHRIFKVPVL GWLFKLAKAI PIAPQKEDPA AYEAAFARAL
GVLREGDLLA IFPEGAITRD GQLQPFKGGV MKIIESARAE GIEPPVIPMA LTNLWGSYFS
RIELRGGENV AMAKPFRRGF FSRVGLNVGH AVPPVEVRPE ALQQRVSGLL AA
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