| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5068 |
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| Symbol | |
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| ID | 7974187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5380809 |
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| End bp | 5382938 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795662 |
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| Product | ATP-dependent DNA helicase RecG |
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| Protein accession | YP_002946936 |
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| Protein GI | 239818026 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCTT CCGCGAAGTC CGTGCCGCCC GAAAAGACCA CAAGCCCGCC CGCTGCCGCC
CCGGCCGCGC CCGGGGCCGG GCTGAGCGCC GTGCAGCGCG CGCTGCGCAA GCTCGGCCTG
GTGCGCGACA TCGACTTCGC GCTCTACCTG CCGATGCGCT ACGAGGACGA GACGCGCATC
GTGCGCCTGG CCGACACGCG CGACGGCGAC ATGGCGCAGG TCGAGGGCGT GGTGACCGAA
TGCGAGGTAG TGTTCCGCCC GCGCCGCCAG CTGATCGCCA CCATCGACGA CGGCAGCGAC
ACCTGCCAGC TGCGCTTCTT CAACTTCTAT CCCTCGCAGC AGAAGCAGCT GGCCGTCGGC
GCGCGCGTGC GCGTGCGGGG CGAGATGCGC GGCGGCTTCG TCGGGCGGCA GATGATGCAT
CCCACCGTCA AGGCGGCCGG CACGGCATTG CCGCAGGCAC TGACGCCGGT CTACTCGACC
ATTGCCGGCC TGCCGCAGCC GGTGCTCCGG CGCGAGGTGC GCTCGGGCCT GGCGCGCGCG
GTGCTCGACG AGACGATCCC CGTGCAGATC GGATGGCGCG GCGCCTGGGA CCTGCGCAGT
TCGCTGACCT TCCTGCACTA CCCGACGCCC GACGTGGCCA TGGCCACGCT CGAAGACCAC
AGCCATCCGG CATGGCAGCG CATCAAGGCG GAAGAGCTGC TCGCGCAGCA GCTCTCGCAA
TTGCAGGCGC GGCTGGAGCG CGCGGCGCAG CGGGCGCCGA TGCTGCCTTC CTCGGCCGAG
CCGCAGGCGA GCTCGCTGCA TGCGCAGCTG CTCGCGGTGC TGCCCTTCGG CCTGACCGGC
GCGCAGCAGC GCGTGGGCGA GGAAATCACG CGCGACCTCG GCCGCGAGAT CCCGATGCAC
CGCCTGCTGC AGGGCGACGT GGGCTCGGGC AAGACCGTGG TGGCGGCGCT CGCGGCGGCG
CGCTGCATCG ATGCGGGCTT CCAGTGCGCG CTGATGGCGC CGACCGAGAT CCTCGCGGCT
CAGCACTTCG GCAAGCTGGT CGGCTGGCTC GATCCGCTCC TGGCCGAGCG CGGCCTGCGC
GTGGCCTGGC TCACCGGCAG CCAGAAGAAG AAGGAGCGCG ACGCGATGTC GGCCGCGGTC
GAGAGCGGCG AGGCGGCGCT GGTCATCGGC ACCCATGCCG TGATCTCGGA GAAGGTGCGC
TTCAAGAACC TCGCATTGGC GATCATCGAC GAGCAGCACC GCTTCGGCGT GGCGCAGCGG
CTGGCCCTGC GCGGCAAGGC CGTGGGCCAC CTCGAGCCGC ACCTGCTGAT GATGAGCGCC
ACCCCGATCC CGCGCACGCT GGCGATGAGC TACTACGCCG ACCTGGACGT TTCCACGCTG
GACGAGCTGC CGCCGGGCCG CACGCCCATC GTCACCAAGC TGGTGGCCGA CCACCGGCGC
GACGAGGTAA TCGACCGCAT CCAGGCGCAG ATCGCGCAGG GCCGGCAGGT CTACTGGGTC
TGCCCGCTGA TCGAGGAGAG CGAAGCGGTC GACCTGCGCA ACGCCACCGA GACGCGCGAC
GAGCTCGCCG ATGCGCTTGG CGCGGCCGTC AACGTCGGGC TGCTGCATTC GCGCATGCCC
ACGGCCGAGA AGCAGGCGGT GATGGCCGCC TTCACGGCCA ACGAGATCCA GGTGCTGGTG
AGCACCACCG TGATCGAGGT GGGCGTGGAC GTGCCGAACG CCTCGCTGAT GGTGATCGAG
CATGCCGAGC GCTTCGGGCT CTCGCAGCTG CACCAGCTGC GCGGCCGCGT GGGCCGCGGC
GCCGCGGCCT CGGCCTGCGT GCTGCTCTAC GCGCCGGGCG ACAGCGGCCG TGTCGGCGAA
GCGGCCCGCG CCCGGCTCAA GGCCATGGCC GAAACCAGCG ATGGTTTCGA GATCGCGCGG
CGCGACCTCG AGATCCGCGG CCCCGGCGAA TTCCTGGGAG CGCGCCAGTC GGGCGCGCCG
CTGCTGCGCT TTGCCGACCT CAGCACCGAC ACGATGCTGC TCGACTGGGC GCGCGAGCTC
GCGCCGCTGA TGCTCGACAA GCACCCCGAG CTGGCCCAGC GCCACATCGA CCGCTGGCTC
GGCACCAAGG CCGAGTACCT GAAGGCCTGA
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| Protein sequence | MPASAKSVPP EKTTSPPAAA PAAPGAGLSA VQRALRKLGL VRDIDFALYL PMRYEDETRI
VRLADTRDGD MAQVEGVVTE CEVVFRPRRQ LIATIDDGSD TCQLRFFNFY PSQQKQLAVG
ARVRVRGEMR GGFVGRQMMH PTVKAAGTAL PQALTPVYST IAGLPQPVLR REVRSGLARA
VLDETIPVQI GWRGAWDLRS SLTFLHYPTP DVAMATLEDH SHPAWQRIKA EELLAQQLSQ
LQARLERAAQ RAPMLPSSAE PQASSLHAQL LAVLPFGLTG AQQRVGEEIT RDLGREIPMH
RLLQGDVGSG KTVVAALAAA RCIDAGFQCA LMAPTEILAA QHFGKLVGWL DPLLAERGLR
VAWLTGSQKK KERDAMSAAV ESGEAALVIG THAVISEKVR FKNLALAIID EQHRFGVAQR
LALRGKAVGH LEPHLLMMSA TPIPRTLAMS YYADLDVSTL DELPPGRTPI VTKLVADHRR
DEVIDRIQAQ IAQGRQVYWV CPLIEESEAV DLRNATETRD ELADALGAAV NVGLLHSRMP
TAEKQAVMAA FTANEIQVLV STTVIEVGVD VPNASLMVIE HAERFGLSQL HQLRGRVGRG
AAASACVLLY APGDSGRVGE AARARLKAMA ETSDGFEIAR RDLEIRGPGE FLGARQSGAP
LLRFADLSTD TMLLDWAREL APLMLDKHPE LAQRHIDRWL GTKAEYLKA
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