| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5064 |
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| Symbol | |
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| ID | 7974183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5377482 |
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| End bp | 5378342 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795658 |
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| Product | 4-hydroxybenzoate polyprenyl transferase |
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| Protein accession | YP_002946932 |
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| Protein GI | 239818022 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.82671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCCC GCCGTTTTGC GCTCTATCTC GACCTGATCC GCTGGAACCG CCCCGCCGGC
TGGCTGCTGC TGCTGTGGCC CACGCTGGGC GCGCTCTGGT TCGCGGCCGA AGGCTGGCCG
GGCTGGCACC TGCTGGCCGT GTTCGTGCTG GGCACCATCC TGATGCGCAG CGCGGGCTGC
TGCGTCAACG ACGTGGCCGA CCGCGACTTC GACCGCCACG TGAAGCGGAC CGCCCAGCGG
CCGGTGACCA GCGGCGCGGT CTCGGTCAGG GAGGCGCTGG TGTTGGGTGC GGTGCTGGCG
TTGCTGGCCT TCGGGCTGGT GCTCACGACC AACCGGCTCA CCATCCTGTG GTCGTTCGCG
GCGCTGGCCA TCACGCTGGC CTATCCCTTC GCCAAGCGCT TCGTGTCGGT TCCGCAGGCG
GTGCTCGGCA TTGCCTTCAG CTTCGGCATC CCGATGGCTT TTGCAGCGGT GCAAGCCACG
GTTCCGGTGT TTGCCGCCTG GCTGCTGGCC GGCAACCTGT TCTGGGTGCT GGCCTACGAC
ACCGAGTACG CGATGGTCGA CCGCGACGAC GACCTCAAGA TCGGCATGAA GACCTCGGCC
ATCACCTTCG GCCGCTTCGA CGTGGCGGCC GTCATGGCGA GCTACGGCCT GTTCCTGGCC
GTCTGGGCGT GGGCTGGCGC GAGCCGGGGC CTGGGGGCCG TATTCTTCGC GGCCATCGGC
ATCGCCTTGG CGCAGGCCGC CTGGCACTGG CGGCTGATCC GCGAGCGCAC GCGCGACGGC
TGCTTCAAGG CCTTCCGGCT GAACCACTGG CTCGGCTTCA CCGTGTTTGC CGGCATCGCG
GCCGGCTACG CCGTTCGCTA G
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| Protein sequence | MLARRFALYL DLIRWNRPAG WLLLLWPTLG ALWFAAEGWP GWHLLAVFVL GTILMRSAGC
CVNDVADRDF DRHVKRTAQR PVTSGAVSVR EALVLGAVLA LLAFGLVLTT NRLTILWSFA
ALAITLAYPF AKRFVSVPQA VLGIAFSFGI PMAFAAVQAT VPVFAAWLLA GNLFWVLAYD
TEYAMVDRDD DLKIGMKTSA ITFGRFDVAA VMASYGLFLA VWAWAGASRG LGAVFFAAIG
IALAQAAWHW RLIRERTRDG CFKAFRLNHW LGFTVFAGIA AGYAVR
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