Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5062 |
Symbol | |
ID | 7974181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5376127 |
End bp | 5376984 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795656 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_002946930 |
Protein GI | 239818020 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.25166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG CCGTCACCTT CCTGCCCCGC ACCGCACCGC CGCCGCTGCC TCCGATCGCC TTCATCGGCG GCGGCAACAT GGCCAGCGCC ATCATCGGCG GCCTCATCAA GCAGGGTACG CCCGCCGGCA GCTTCGAGGT GGTCGAGCCC TTCGAGGAGG CCCGCACCAA GCTCGCGCAA TCCTTCGGCA TTGCCGCTCA CGCCGAGGCC GGCGACGCCC TTTCGCGCTG CTCGGTGGTG GTGTGGGCGG TCAAGCCGCA GACTTTTGCG GACGCGGCCG TCCCGGTGCG CGCATTCGCG GCCAACGCAC TGCACCTGAG CGTGGCGGCC GGCATTCCGT CGGGCAGCAT TGCGCGCTGG CTCGGCAGCG AACGCGTGGT GCGCGCCATG CCCAACACGC CGGCGCTGGT GGGCCAGGGC ATGACCGGCC TTTTTGCGCG GACCGCGGTG GAGGCCGCCG ACCGCTCCCT GGTCGGGCAG CTGCTGGCGC CGACCGGCGA GCTGCTCTGG GTCGACGACG AAGCCGCGCT CGATGCGGTG ACGGCCATGT CGGGCTCCGG CCCGGCCTAC GTCTTCTATT TCATCGAAGC GATGACCGAA GCCGGCGTCG AGATGGGCCT GCCGCTCGAG CAGGCCCAGC GGCTGGCCAT CGGCACCTTC ACCGGCGCTT CGGCACTGGC GCACAGCGCC ACCGAGCCGC CGTCGGTGCT GCGCGAACGC GTGACCTCCA AGGGCGGCAC CACCCACGCG GCAATCAGCG CGCTCGAGGG CGCCGACGTC AAGGCGAAGT TCAAGGCCGC CATCCGTGCG GCGCAGAAGC GCGCCGCCGA GCTGGGCGAC GAATTCGGCC GCGCCTGA
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Protein sequence | MTIAVTFLPR TAPPPLPPIA FIGGGNMASA IIGGLIKQGT PAGSFEVVEP FEEARTKLAQ SFGIAAHAEA GDALSRCSVV VWAVKPQTFA DAAVPVRAFA ANALHLSVAA GIPSGSIARW LGSERVVRAM PNTPALVGQG MTGLFARTAV EAADRSLVGQ LLAPTGELLW VDDEAALDAV TAMSGSGPAY VFYFIEAMTE AGVEMGLPLE QAQRLAIGTF TGASALAHSA TEPPSVLRER VTSKGGTTHA AISALEGADV KAKFKAAIRA AQKRAAELGD EFGRA
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