Gene Vapar_5059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5059 
SymbolrplX 
ID7974178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5374021 
End bp5374353 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID644795653 
Product50S ribosomal protein L24 
Protein accessionYP_002946927 
Protein GI239818017 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0803944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA TTCGCAAAGG CGACCAGGTC ATCGTGTTGG CCGGGCGCGA CAAGGGCAAG 
CGCGGCACCG TCTCGCTGCG CAAGGATGAT TCGCACCTCG TCGTCGAGGG CGTGAACATC
GTCAAGAAGC ACGCCAAGCC GAACCCCCTC AAGGGTACGA CCGGCGGCAT CGTCGAGAAG
ACCATGCCCA TCCACCAATC CAACGTGGCG ATCTTCAATG CCGCGACCGG CAAGGCCGAT
CGCGTGGGCA TCAAGATCAC CCAGGGTGCT GACGGCAAGC GCGTGGCTGT TCGCGTCTTC
AAGTCCAGCG GCGACGAAAT CAAGTTCGCC TAA
 
Protein sequence
MNKIRKGDQV IVLAGRDKGK RGTVSLRKDD SHLVVEGVNI VKKHAKPNPL KGTTGGIVEK 
TMPIHQSNVA IFNAATGKAD RVGIKITQGA DGKRVAVRVF KSSGDEIKFA