Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5059 |
Symbol | rplX |
ID | 7974178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5374021 |
End bp | 5374353 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644795653 |
Product | 50S ribosomal protein L24 |
Protein accession | YP_002946927 |
Protein GI | 239818017 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0198] Ribosomal protein L24 |
TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0803944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA TTCGCAAAGG CGACCAGGTC ATCGTGTTGG CCGGGCGCGA CAAGGGCAAG CGCGGCACCG TCTCGCTGCG CAAGGATGAT TCGCACCTCG TCGTCGAGGG CGTGAACATC GTCAAGAAGC ACGCCAAGCC GAACCCCCTC AAGGGTACGA CCGGCGGCAT CGTCGAGAAG ACCATGCCCA TCCACCAATC CAACGTGGCG ATCTTCAATG CCGCGACCGG CAAGGCCGAT CGCGTGGGCA TCAAGATCAC CCAGGGTGCT GACGGCAAGC GCGTGGCTGT TCGCGTCTTC AAGTCCAGCG GCGACGAAAT CAAGTTCGCC TAA
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Protein sequence | MNKIRKGDQV IVLAGRDKGK RGTVSLRKDD SHLVVEGVNI VKKHAKPNPL KGTTGGIVEK TMPIHQSNVA IFNAATGKAD RVGIKITQGA DGKRVAVRVF KSSGDEIKFA
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