| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5037 |
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| Symbol | |
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| ID | 7974155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5357337 |
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| End bp | 5358605 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795630 |
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| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
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| Protein accession | YP_002946905 |
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| Protein GI | 239817995 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0881732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCT TGATACCCAA GATCGAGTCG CAGCTTGCGT CGCTGCCCGT GCCCATCGCG
CTGGAACTGC CTGATGGCCG AAGAGTTGCC AAGCCGGGGT CGCGTGTCAC CCTGGCGTTC
AGCGAGTGGT CGGCGCTGGC CAAGCTGGCG GCGCACCAGG TGGGGGCCAT CGGCGAGGCT
TATGTGGAAG GCCGGGTGCA GATCGAAGGC GCGATGCGCG ACCTGATCGA CGCCACGGTC
GGCATGCTGC CGGGCAACCC CGCGGAGACC AACACCACCT GGTGGACCCG CCTGATGCGG
CTGGCCAAGT CCCACAGCTC GCATTCGCTG CACAAGGATG CCGAGCAGAT CCAGTTCCAC
TACGACGTTT CCGACGACTT CTACGCGCTG TGGCTCGATC CGCGCCGGGT GTATTCGTGC
GCCTATTTCC GCACCCCGGG GCTGACGCTC GCGCAGGCCC AGGAGGCCAA GCTGGACCAC
ATCTGCCGCA AGCTCATGCT GCAGCCCGGC GAGCGTTTTC TCGACATCGG CTCCGGCTGG
GGCGGGCTGC TGCTGTGGGC GGCGGAGCAC TACGGCGTCG ACGCCACCGG CATCACGCTG
TCGAAGAACC AGCATGCACA CGTGCAGCGC CTGATCCAGG AAAAGGGCCT GCAGGGCCGC
GTGCGGGTGG AGCTGCGCGA CTACCGCGAA CTTTCCGCTG ACGCACCTTT CGACAAGATC
GCGTCGGTCG GCATGTTCGA GCACGTGGGC GCGGCCAACA TGCCCACCTA TTTCCGCAAG
ATCCATTCGC TGCTCAAGCC CGGCGGGCTG GTGCTGAACC ACGGCATCAC CTCGGGCCAG
CTCGACTACC GCCAGCTGGG CGCGGGCATG GGCGACTTCA TCGAGAAGTA CATCTTTCCG
GGCGGCGAGC TGCTGCACGT GACGCATGTG CTGCGCGAGA CGGCGGCCGC GGGCCTGGAG
ATGGTCGATA CCGAAAGCCT GCGCCCGCAC TATGCGCGCA CGCTCTGGGC CTGGTCGGAT
GCGCTGGAGT CGCAGCTGGA CACGGCGCGC GAGGTGCTCG CGCGCGCGGG CGGGCGGCAG
GGCGAGAATG CCGAGCGCAT CCTGCGCGCC TACCGCCTCT ACCTGGCGGG CTCGGCCATG
AGCTTCGAGC AGGGCTGGAT CTCACTGCAC CAGATGCTTT CGACCAAGCC CGACGGCCGG
GTCGAGCATG GTGTTTTGCG CGGTTCGCAA TCGGTGTACC CTTTTGCCCG TGACTACATC
TACAAGTGA
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| Protein sequence | MQSLIPKIES QLASLPVPIA LELPDGRRVA KPGSRVTLAF SEWSALAKLA AHQVGAIGEA
YVEGRVQIEG AMRDLIDATV GMLPGNPAET NTTWWTRLMR LAKSHSSHSL HKDAEQIQFH
YDVSDDFYAL WLDPRRVYSC AYFRTPGLTL AQAQEAKLDH ICRKLMLQPG ERFLDIGSGW
GGLLLWAAEH YGVDATGITL SKNQHAHVQR LIQEKGLQGR VRVELRDYRE LSADAPFDKI
ASVGMFEHVG AANMPTYFRK IHSLLKPGGL VLNHGITSGQ LDYRQLGAGM GDFIEKYIFP
GGELLHVTHV LRETAAAGLE MVDTESLRPH YARTLWAWSD ALESQLDTAR EVLARAGGRQ
GENAERILRA YRLYLAGSAM SFEQGWISLH QMLSTKPDGR VEHGVLRGSQ SVYPFARDYI
YK
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