Gene Vapar_5036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5036 
Symbol 
ID7974154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5357001 
End bp5357324 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID644795629 
Producthypothetical protein 
Protein accessionYP_002946904 
Protein GI239817994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.137842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTACC GATTCCAGTC CCGGGCCTCC CCTGACTTCG TGATGCTGGA GGTGCATGCC 
CGCCAGCTGT TCGACATCAT CGGCAAGGCA CCCGCGCCGC AAGGCATCGT CACGGTCGAG
CAGATCCCGG GCGCCATTGC GGCGCTCGAG TCCGCGCTGG CGCGCGAGGC CAGCAACCCG
CACAACCACG ACGACTACGC CGTCGAAGGC CATGCCAACG AGGCCGAGAA GCAGCACGTG
GGCCTGCACC AGCGCGCAGC CCCGCTGCTC CACATGCTCA GGGACTCCCT GGCCGAGAAA
AAAGACGTGA CCTGGAAGAC CTGA
 
Protein sequence
MLYRFQSRAS PDFVMLEVHA RQLFDIIGKA PAPQGIVTVE QIPGAIAALE SALAREASNP 
HNHDDYAVEG HANEAEKQHV GLHQRAAPLL HMLRDSLAEK KDVTWKT