Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5025 |
Symbol | |
ID | 7974143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5344393 |
End bp | 5344833 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644795618 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_002946893 |
Protein GI | 239817983 |
COG category | [R] General function prediction only |
COG ID | [COG3565] Predicted dioxygenase of extradiol dioxygenase family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGCCA TGAATGCACC CCCCACGAGA ATTCCGTTCC ACCTGGCTTT CCCCGTCCGC GACATTGCCG AAGCCCGCGC CTTCTACGGC GAGCTGCTCG GATGCCCCGA GGGCCGCAGC GCGCCCGAAT GGGTCGACTT CGACTTCTAC GGCCACCAGA TCGTGGCGCA CCTCGCCCCC GATGAATGCG GCCACAAGGC CAGCAGCGCG GTCGACGGGC ACGACGTGCC GGTGCGCCAC TTCGGCGCCA TCCTCCCGAT GGACCAATGG CAGGCGCTGG CCGACAAGCT GGTCGCGCGC CAGACCCGCT TCGTGATCGA GCCCTACATC CGCTTCAAGG GCGAGCCGGG CGAACAGGCG ACGATGTTCT TCCTCGATCC GTCGGGCAAT GCCATCGAGA TGAAGTCCTT CGCGAATCTC GATTCGCTGT TCGCCGTCTG A
|
Protein sequence | MAAMNAPPTR IPFHLAFPVR DIAEARAFYG ELLGCPEGRS APEWVDFDFY GHQIVAHLAP DECGHKASSA VDGHDVPVRH FGAILPMDQW QALADKLVAR QTRFVIEPYI RFKGEPGEQA TMFFLDPSGN AIEMKSFANL DSLFAV
|
| |