| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5013 |
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| Symbol | |
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| ID | 7974131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5326941 |
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| End bp | 5327516 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795607 |
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| Product | intracellular protease, PfpI family |
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| Protein accession | YP_002946882 |
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| Protein GI | 239817972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCA CCATCTCTTC TTCTTCACTG GACGGAATGA AGGTTGCCAT CCTCGTGGCG
GACGGCTTCG AGCAGGCCGA GATGACCGAG CCGCGCAAGG CGCTTGAGCT GGCCGGCGCA
CAGACGCAGA TCGTTTCGCC GCTCGACGGC AGCGTGCGTG CCTGGAAGCA GCTCGAGCCG
GCCGACACCT TCGAGGTCGA CGTGCCGCTC AAGAACGCCG ATGCCGACGA CTTCGACGCG
CTGCTGCTGC CCGGCGGCGT CGCCAACCCC GACGCGCTGC GCATCAACCA GAAGGCCGTG
GCCTTCGTGC GTGCCTTCGT CGAGTCGGGT AAGCCCATCG CGGCCATCTG CCACGGGCCC
TGGACTCTCA TCGATGCCGG CGGCGTGCAG GGGCGCAGGA TGACCTCGTG GCCTTCGCTG
CGCGCCGACC TGCACAACGC CGGCGCAAAG TGGGTCGACA AGGAGGTGGT GGTCGACAGC
GGCCTGGTGA CGAGCCGCAG GCCCGGCGAC CTGCCCGCGT TCATCCGCGA GATGACGACG
ATGTTCGAGC TCGCGCACGA GGCTGCGATC CATTGA
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| Protein sequence | MPTTISSSSL DGMKVAILVA DGFEQAEMTE PRKALELAGA QTQIVSPLDG SVRAWKQLEP
ADTFEVDVPL KNADADDFDA LLLPGGVANP DALRINQKAV AFVRAFVESG KPIAAICHGP
WTLIDAGGVQ GRRMTSWPSL RADLHNAGAK WVDKEVVVDS GLVTSRRPGD LPAFIREMTT
MFELAHEAAI H
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