| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5011 |
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| Symbol | |
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| ID | 7974129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5324741 |
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| End bp | 5325553 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795605 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946880 |
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| Protein GI | 239817970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC CCAACATCAT CCTCAATGTC AACGGCATCG AGGTCATCTA CAACCACGTG
ATCCTCGTGC TCAAGGGCGT GTCGCTCACG GTGCCCGAAG GCGGCATCGT GGCGCTGCTC
GGCGGCAACG GCGCGGGCAA GACGACCACC TTGCGCGCGG TGAGCAACCT GCTCGCGGGC
GAGCGCGGCG CGGTCACCAA GGGCACGATC GAACTGCGCG GCGAGCGCAT CGAGGCGCTG
TCGCCGGCCG AGCTGGTGAA GCGCGGGCTG ATCCAGGTGA TGGAAGGCCG GCACTGCTTC
GCGCACCTGA CGATCGAGGA AAACCTGATG ACCGGCGCCT ACACGCGCAG CGACGGCAAG
GCCGCGGTGC AGCAGACGCT GGAGAAGGTG TATGCGTATT TCCCGCGGCT GAAGACCCGG
CGCACTTCGC AGGCGGCCTA CACCTCGGGC GGCGAGCAGC AGATGTGCGC CATCGGCCGC
GCGCTGATGG CCAACCCGAA CATGGTGCTG CTCGACGAGC CCTCGATGGG CCTGGCGCCG
CAGATCGTGG AGGAGGTGTT CGAGATCGTG AAGGACCTCA ACACCAAGGA ACGCGTGACC
TTCCTGCTGG CCGAGCAGAA CACCAACATG GCGCTGCGCT ACGCCGACTA CGGCTACATC
CTGGAGAACG GCCGCATCGT GATGGACGGG CCGGCCAAGA GCCTGCGCGA GAACGAGGAC
GTGAAGGAGT TCTACCTGGG CGTGGGCGGT GCGGACCGCA AGAGCTTCCG CGATGTGAAG
AGCTACAAGC GGCGCAAGAG GTGGCTTGCA TGA
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| Protein sequence | MSEPNIILNV NGIEVIYNHV ILVLKGVSLT VPEGGIVALL GGNGAGKTTT LRAVSNLLAG
ERGAVTKGTI ELRGERIEAL SPAELVKRGL IQVMEGRHCF AHLTIEENLM TGAYTRSDGK
AAVQQTLEKV YAYFPRLKTR RTSQAAYTSG GEQQMCAIGR ALMANPNMVL LDEPSMGLAP
QIVEEVFEIV KDLNTKERVT FLLAEQNTNM ALRYADYGYI LENGRIVMDG PAKSLRENED
VKEFYLGVGG ADRKSFRDVK SYKRRKRWLA
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