| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5007 |
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| Symbol | |
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| ID | 7974125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5320401 |
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| End bp | 5321186 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795601 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946876 |
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| Protein GI | 239817966 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATC GAAAAATCGG CGACGTCATC CTCGACGTCC AGAACATCAG CCTGAGCTTC
GGCGGCGTGA AGGCGCTCAC GGACATCAGC TTCAACGTGC GCGAGCATGA AGTGCGGGCC
ATCATCGGAC CGAACGGCGC GGGCAAGAGC TCGATGCTCA ACTGCATCAA TGGCGTGTAC
TGGCCGCAGC AGGGCTCCAT CACTTTCCGC GGCCAGACCT TCAAGCACAT GAACTCGCGC
CAGGTGGCCG AGATGGGCGT GGCGCGCACC TTCCAGAACC TGGCGCTCTT CAAGGGCATG
AGCGTACTCG ACAACATCAT GACGGGGCGC AACCTCAAGA TGAAGAGCGG CCTGCTCGCA
CAGGCGCTGC GCTGGGGACC GGCCGAGCGC GAGGAGCTGC AGCATCGCGA GTTCGTCGAG
CACATCATCG ACTTCCTGGA GATCCAGGCG CACCGCAAGA CGCCGGTGGG CCGCCTGCCC
TACGGCCTGC AAAAGCGCGT CGACCTGGGC CGCGCGCTCG CGATGGAGCC GCAGGTGCTG
CTGCTCGACG AGCCGATGGC CGGCATGAAC GTGGAGGAAA AGCAGGACAT GAGCCGCTTC
ATCCTCGACG TGAACGACGA GTTCGGCGCG ACCATCGTTC TCATCGAGCA CGACATGGGC
GTGGTGATGG ACATCTCCGA CCGCGTGGTG GTGCTGGACT ACGGCAAGAA GATCGGCGAC
GGCACGCCCC ACGAGGTGCG CAACAACGAA GACGTGATCC GGGCATACCT GGGCGTGGAG
CACTGA
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| Protein sequence | MSNRKIGDVI LDVQNISLSF GGVKALTDIS FNVREHEVRA IIGPNGAGKS SMLNCINGVY
WPQQGSITFR GQTFKHMNSR QVAEMGVART FQNLALFKGM SVLDNIMTGR NLKMKSGLLA
QALRWGPAER EELQHREFVE HIIDFLEIQA HRKTPVGRLP YGLQKRVDLG RALAMEPQVL
LLDEPMAGMN VEEKQDMSRF ILDVNDEFGA TIVLIEHDMG VVMDISDRVV VLDYGKKIGD
GTPHEVRNNE DVIRAYLGVE H
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