| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4983 |
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| Symbol | |
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| ID | 7974265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5295685 |
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| End bp | 5296341 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795578 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002946853 |
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| Protein GI | 239817943 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.308886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTGC TGCTGGTGGA AGACGACGAG ATGATCGGGC GCAGCCTGAA GCAGGCGCTC
GAGGGCGCGG GCTGGTCGGC CGACTGGGTG CGCGACGGCG AACTGGCGCA AAGCGCGCTC
GGCGACGGCG GCTACACCTG CGTGCTGCTC GACCTGGGCC TGCCGCGGCA GGACGGCACC
GAGGTGCTGC GCCGCGCGCG CGAACGCGGC GACGCCACGC CGGTGCTGGT GCTCACCGCG
CGCGACGGGC TGGACGACCG CATCCACAGC CTCGACCTGG GCGCCGACGA CTATCTGCTC
AAGCCCTTCG AATTCCGCGA GCTGCTCGCG CGCATGCGGG CCGTCGTGCG CCGGCGCGAC
GGCGCCGCGC ATTCGCTGAT CGGCGGCAGC ACGATGCAGC TGGACCTCAC CACGCGCGAG
GTGCTGGTCG ATGGCGTGCG CGAGGCGCTC ACCGCACGCG AGTTCGCGCT GCTGCACGCC
CTGCTCGAGC GGCCCGGCGC CATCCTCTCG CGCGAGCAGC TCGAGAACCG CATCTACGGC
TGGGGCGAAG AGGTGACCAG CAACGCCATC GACGTGCTGA TCCACGGCAT GCGCCGCAAG
CTCGGCGCCG ATTCGATCCG CAACGTGCGC GGGCTCGGCT GGCGCGTCGC CGCATGA
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| Protein sequence | MRVLLVEDDE MIGRSLKQAL EGAGWSADWV RDGELAQSAL GDGGYTCVLL DLGLPRQDGT
EVLRRARERG DATPVLVLTA RDGLDDRIHS LDLGADDYLL KPFEFRELLA RMRAVVRRRD
GAAHSLIGGS TMQLDLTTRE VLVDGVREAL TAREFALLHA LLERPGAILS REQLENRIYG
WGEEVTSNAI DVLIHGMRRK LGADSIRNVR GLGWRVAA
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