| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4982 |
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| Symbol | |
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| ID | 7974264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5294220 |
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| End bp | 5295623 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795577 |
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| Product | histidine kinase |
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| Protein accession | YP_002946852 |
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| Protein GI | 239817942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.305524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAG CGCCGGGCCG CTGGTGGCGC CCGCGCTCGC TGCGCACGCA GCTCCTGTTC
TGGCTCGTCA CGCTGCACCT GGTGGCGGCG GCGCTCACGG CGTGGTTCAC CTTCGTGGCC
TATGGCGACC TGGTGCACAA CGCGCTCGAC GAACAGATGC GGCTGGTGGC CGATTCCTAT
GCGGGCAGCG ACCCGCCGCG CACCCCGCGT TCGCTCGACG GCAACGCCGC GCTCGTGCGC
GGCGCCTTCG TGGTGCAGCT CTGGAGCGCG GACGGCCGCA CGCTGCGCGC AAGCTCGTGG
CCGCCGCTGG CGGTGGTGCC GCTGCAGCCG CAGCCGGGTT TCAGTGATGC GAGCGCCGAT
GCGCCCGCGC CTTCGCGCTG GCGCGTGTTC ACGGCCGAGG CCGGGCCGCG CGCCGACCAG
CCGCGCGTGC AGGTGCTGCA GAACGAGGAC TACCGCCGGC GCCGCGCCCT GCGCCGCGCG
CTGCTCGAAG GCCTGCCCAT CGCGCTGCTG CTGCCGCTGG CCTTGCTGAT CCTCTGGCTC
ATCGTGTCGG CGGCTTCGCG CTCGCTGCGC GCGGTGGCGC GCGACGTGGC CTCGCAGGAC
GAGCGCCGCC CCACCGAGCT GTCGCTGGCG CGCGTGCCGG ACGAGATCGC GCCGCTGGTG
CAGGCCTTCA ACCAGCTGCT GTCGCGCATG CGCAGTGCCT TCGCCACGCA GCGCCGCTTC
GTGCAGGACG CGGCCCACGA GCTGCGCACG CCGATGGCCG CGATCGGCCT GCAGATCGAG
AACCTGCGCG CGCACGTGCC CGCGGGCGAA GCCACCGAGC GCTTCAACCA GCTGGAAGCC
GGCGTCACGC GCGCGCAGCA CCTCATCGAG CAGCTGCTGA GCCTCTCGCG GCAGGACGCG
CCGGGGCGTC CCATGCCGGG CGAGCCGGTC GACATCGAAA CCCTGCTGCG CGAGAGCGTG
AGCCAGCTGA TGGTGCTGGC CGATGCGCGG CGCGTGGACA TCGGCTTCGA GGGCTCGATC
GCGCCCGTGG TGCAGGCGCC GGCCGCCGAG CTGCGCAGCG TGTTCGACAA CCTGATCGAC
AACGCGCTGC GCTATGCGCC CGAAGGCGGC GTGGTCGACG TGCGGCTGCA CGAGGTCGAC
GGCCATGCGG TGGTCGATGT GCTCGACAAC GGCCCGGGCA TTCCGGCCTC GGCCATCGGC
CGCGTGTTCG ACCGTTTCTT TCGCGTGCCG GGTGCGCCGG TGGGCGGCAG CGGCCTCGGG
CTGGCGATTG CGCGCACCGC GGCCGAGCGG CACGGCCTGC GCATCGAGCT GCGCAACCGC
GATGAAGCAG AAGAGGGCGG CAGTCCGGGG CTGCTGGCAC GGGTGCACCT GCCTGCGGCA
TCAATTCCGC TCACGCCGGG CTAA
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| Protein sequence | MTSAPGRWWR PRSLRTQLLF WLVTLHLVAA ALTAWFTFVA YGDLVHNALD EQMRLVADSY
AGSDPPRTPR SLDGNAALVR GAFVVQLWSA DGRTLRASSW PPLAVVPLQP QPGFSDASAD
APAPSRWRVF TAEAGPRADQ PRVQVLQNED YRRRRALRRA LLEGLPIALL LPLALLILWL
IVSAASRSLR AVARDVASQD ERRPTELSLA RVPDEIAPLV QAFNQLLSRM RSAFATQRRF
VQDAAHELRT PMAAIGLQIE NLRAHVPAGE ATERFNQLEA GVTRAQHLIE QLLSLSRQDA
PGRPMPGEPV DIETLLRESV SQLMVLADAR RVDIGFEGSI APVVQAPAAE LRSVFDNLID
NALRYAPEGG VVDVRLHEVD GHAVVDVLDN GPGIPASAIG RVFDRFFRVP GAPVGGSGLG
LAIARTAAER HGLRIELRNR DEAEEGGSPG LLARVHLPAA SIPLTPG
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