| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4979 |
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| Symbol | |
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| ID | 7974261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5291865 |
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| End bp | 5292875 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795574 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002946849 |
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| Protein GI | 239817939 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0403893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAA GCAGAACGCT CAGGCGCTGG CAACTTTCTT CCTTCGGCCG CGAGCAGCTC
GAACAGGTGG CGCTGCCGCT GCCCACGCCC GGACCGGGCC AGGTCCTCGT CGAGGTGGGC
GCGGTGTCGC TCAACTACCG CGACCTGCTG ATGATCCGCG ACGGCATGGG CATGACGTTC
GACCTGCCCT TCACGCCCGG TTCCGACATG GCCGGCACGG TGGTGGCGAC CGGACCGGGC
GTGCAGCGCC TGGCCGTGGG CGACCGCGTG GTCAACACCT TCTGGGGCGG CTGGATCGAC
AGCCACTGGC CGGCCGAGGC CGTGCCGATG GGCGGCCCCG GCCCGGGCAT GCTGGCCTCG
CACGTGCTGA TCGACGCGGC CTGGGCCGTG GCTGCACCCG CCACGCTCGA TTTCGCGCAG
GCCAGCACGC TGCCGTGCGC CGGCCTCACG GCTTGGTTCG CGCTGGCCGA GACCGGCGCG
CTGCGGCCCG GCCAGACCGT GCTGGTCCAC GGCACCGGCG GCGTGGCGCT GTTCGGCGTG
CAGCTCGCGC GGCTGCACGG CGCGCGCGCC ATCGTGGTCA CGGGCAGCGA GGAGAAGCGT
GCGCAGACGC TGGCGCTGGG CGCCAGCGAG GTGCTGATGC GCGAGGGCGA CTGGCCGGCC
GAAGTGCGCC GCCTCACGCA AGGGCGCGGC GCCGACCACG TGCTCGAACT CGCGAGCGGG
CCGAACCTCG ACCGTTCGCT GCAGGCGGTG GCGCAGGGCG GGCGCGTGTC GATCATCGGC
ATGCTCGGCG GCGAGACGCT CAGCGCATCG TTCTACGCGA TGGTGCTCGG CCGTGTCACG
GTGCAGGGCA TTGGCGTGGG CCATCGGCGC GCGCTCGAAG ACCTGGTGCG CGCCGTCGAC
GCCAATGCGC TCGAGCCCGT GATCGCGGCG CGCTACGCCT TCGACGACGT GCCCGATGCG
CTCGACCACC TCGCGCGCGG CGCCTTCGGC AAGATCGTCG TCGTGCCCTG A
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| Protein sequence | MQASRTLRRW QLSSFGREQL EQVALPLPTP GPGQVLVEVG AVSLNYRDLL MIRDGMGMTF
DLPFTPGSDM AGTVVATGPG VQRLAVGDRV VNTFWGGWID SHWPAEAVPM GGPGPGMLAS
HVLIDAAWAV AAPATLDFAQ ASTLPCAGLT AWFALAETGA LRPGQTVLVH GTGGVALFGV
QLARLHGARA IVVTGSEEKR AQTLALGASE VLMREGDWPA EVRRLTQGRG ADHVLELASG
PNLDRSLQAV AQGGRVSIIG MLGGETLSAS FYAMVLGRVT VQGIGVGHRR ALEDLVRAVD
ANALEPVIAA RYAFDDVPDA LDHLARGAFG KIVVVP
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