| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4978 |
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| Symbol | |
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| ID | 7974260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5290850 |
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| End bp | 5291767 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795573 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946848 |
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| Protein GI | 239817938 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.486149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCAC GCCTGCAAGG CATCGAAGAG TTCGTGGCCG CGGTGGAGGC CGGCAGCTTT
GCGCGCGCAG CCGAGCGGCT GCACGTCACG CGCTCGGCGG TGGCCAAGAG CATCGGGCGG
CTCGAAGCGC GGCTGGGCAC GCGGCTCTTC CTGCGCACCA CGCGCAGCCA GAGCCTCACC
GAAGAAGGCC ACGGCTACTA CGAGCGCTGC CGGCGCGTGC TGGCCGAGCT CGACGCCGCC
GAGGCCATGG CCGATGCCGC GCGCAGCACC GCGGCCGGGC TGGTGCGCCT GAGCATGCCG
GCCATGCTGG GGCGGCTGAA GGTCGGGCCG CTGCTGCTCG CGCTGGCGCG CCGGCATCCG
GGGCTGTCGC TGGAGCTTTC CTTCAACGAC CGGCGCGTGG ACCTCGTCGA AGACGGTCTG
GACCTGGCCA TCCGCAGCGG CGAGCTGGCC GACAGCGCCG AGCTGGTTGC GCGGCCGGTC
GGCGTGCAAT GGATGGCGCT GTGCGCCGCG CCCGCCTACC TGGCCGAGCG CGGGCGCCCG
GGCAGCGTGG CCGAACTGGG TGCATCGCCG TCGCACGAGG CCGTGTTCTA TGCGCGCGAC
GGGCAGGTCT CGCCCTGGCG CTTCCACGAC GCCGATGGCC GGCTGGTGGA AGTGGTGCTG
CCCTCGCGGC TGCGCTGCGA CAGCGCCGAA GTGCTGCTCG AAGCCGCCAT CGGCGGCATG
GGGCTGGCGC GCCTGCCGGC CTGGCTCGCG GCCGATGCGC TGGCGGCCGG CACGCTGGTG
CGCGTGTTCG AGGAGCCGCG GCCCTTTGGT TTCGCGCTCA ACGTGATCCG CTCGCGCAGC
CGCTACCTGC CCCACAAGAC GCGCGTGGTG GTCGACTGGC TGGCCGAGCA CCTGCCGCCG
CTGCTGGCGG CCCGCTGA
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| Protein sequence | MSPRLQGIEE FVAAVEAGSF ARAAERLHVT RSAVAKSIGR LEARLGTRLF LRTTRSQSLT
EEGHGYYERC RRVLAELDAA EAMADAARST AAGLVRLSMP AMLGRLKVGP LLLALARRHP
GLSLELSFND RRVDLVEDGL DLAIRSGELA DSAELVARPV GVQWMALCAA PAYLAERGRP
GSVAELGASP SHEAVFYARD GQVSPWRFHD ADGRLVEVVL PSRLRCDSAE VLLEAAIGGM
GLARLPAWLA ADALAAGTLV RVFEEPRPFG FALNVIRSRS RYLPHKTRVV VDWLAEHLPP
LLAAR
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