Gene Vapar_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4967 
Symbol 
ID7974249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5278165 
End bp5278590 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID644795562 
ProductOsmC family protein 
Protein accessionYP_002946837 
Protein GI239817927 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03561] peroxiredoxin, Ohr subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.35536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA AGCTCGACAA GGTTCTCTAC ACCGCTGAAG CCCACACCAT CGGCGGCCGC 
GACGGCGCAG GCAAGTCCAG CGACGGCGCC ATCGACGTCA AGCTCAGCTC GCCCGGTTCG
GGCAAGCCCG GCACCAACCC CGAGCAGCTG TTCGCAGTCG GCTATGCCGC CTGCTTCATC
GGCGCGATGA AGGCCGTCGG TCCGAAGATC GGCGTGAAGG TGCCCGAGGA CGTGGCGATC
GACTCCAGCG TTTCCCTGGG CCCGACGAAC GGCGGCGCTG CCTACGGCAT CGCCGTGAAG
CTGGCCATCA CGCTGCCGGG CCTGGACGCC GAGCAGAAGC AGAAGCTGGT CGACGCGGCC
CACCAGGTCT GCCCGTACTC GAACGCCACG CGCGGCAACA TCGACGTCGA ACTCTCGATC
GCCTGA
 
Protein sequence
MTTKLDKVLY TAEAHTIGGR DGAGKSSDGA IDVKLSSPGS GKPGTNPEQL FAVGYAACFI 
GAMKAVGPKI GVKVPEDVAI DSSVSLGPTN GGAAYGIAVK LAITLPGLDA EQKQKLVDAA
HQVCPYSNAT RGNIDVELSI A