| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4961 |
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| Symbol | |
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| ID | 7974243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5272962 |
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| End bp | 5273933 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795556 |
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| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
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| Protein accession | YP_002946831 |
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| Protein GI | 239817921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCG CACCGTTCCA CGCCGGCGAG CGCGCGCTGC AGGTACAAAC GGGCTGGCGC
GAGCGTATGG AAGCCATGGG CCCGCGCGTG ATCCGCGACT ACATGCCCGA CCAGCACCGC
GAATTCTTCG CGCAGCTGCC CTTCCTCGTG GTCGGCAGCC TCAATGCCAA TCTGCAGCCC
TGGGCCAGCG TGCTCGCGGC GCCTGCGGGC TTCGCGCATT CGCCCGATGC CACGCACCTG
CGCGTCGATG CGCTGCCGGC GGCCGGCGAT CCGCTGGCCG GGCAGCTCGC GCAGGGTGCC
ACGCTCGGCC TGCTGGGCAT CGAGCCGCAC ACGCGGCGGC GCAACCGCAT GAACGGCACG
GTCGAGTCGC TCGATGCGGG CGGTTTCATG GTCGCTGTGC AGCAGAGCTT CGGCAACTGC
CCGCGCTACA TCCAGGCGCG CGAGCCGGAA CTGGTGGCCG CACGCGACGG CGGCGCGCCC
GTGCAGCGGC TCGACGCGCT CGACCTCGAC GCACAGCGCC TCATCGGCAG CGCCGACACG
CTGTTCATCG CCACCGCGTA CCCGGGCGAT GTGGCCAGCG GCGACGCGGC CGATGCGTGC
TCGCACGGTG TCGACGTGTC GCATCGTGGC GGCCGGCCCG GCTTCGTTCG CGTCGACGCG
GGCGGCGTGC TCACGGTGCC CGACTTCAAC GGCAACCGCT TCTTCAACAC GCTGGGCAAC
CTGGTGGCCC ATCCGCGTGC GGGCCTGCTG TTCATCGACT ACGACAACGG CGATCTGCTG
CATGTGGCGG CCACCGCCGA GCTGGTGCTG GACGGCCCCG AGATCGCCGA GTTCGAAGGC
GCCGAGCGGC TGCTGCGGCT GCATGTGGAG CACGCACTGC GCCGGCCCGC CGCCCTGCCG
TTGCGCTGGG GCGACGCGGC GCTGTCGCCG CACCTCGAAG GCACCGGGCG CTGGGCTGCC
GCGCGCGCCT GA
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| Protein sequence | MIAAPFHAGE RALQVQTGWR ERMEAMGPRV IRDYMPDQHR EFFAQLPFLV VGSLNANLQP
WASVLAAPAG FAHSPDATHL RVDALPAAGD PLAGQLAQGA TLGLLGIEPH TRRRNRMNGT
VESLDAGGFM VAVQQSFGNC PRYIQAREPE LVAARDGGAP VQRLDALDLD AQRLIGSADT
LFIATAYPGD VASGDAADAC SHGVDVSHRG GRPGFVRVDA GGVLTVPDFN GNRFFNTLGN
LVAHPRAGLL FIDYDNGDLL HVAATAELVL DGPEIAEFEG AERLLRLHVE HALRRPAALP
LRWGDAALSP HLEGTGRWAA ARA
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