| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4958 |
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| Symbol | |
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| ID | 7974240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5270002 |
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| End bp | 5270961 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795553 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946828 |
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| Protein GI | 239817918 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGCG CGGCCGCCGC TGCCGGGGCC GGGCCTGCGC TGCTGTGGCC CCGCTTGGCG
GGCGCGGCCG AGCCGCAACT CGTTTCGAAG CTGCGCATCG TGATTCCGGC CAACGAAGGC
GGCGGCTGGG ACCAGACCGG CCGCGCGCTC GGCGCGGCGC TGCTGGCCTC GGGCGCGGCG
GGCGAGGTGG TCTACGAGAA CATCGGCGGC AAGGGCGGCA CCATCGGCCT TGCAAAGTAC
GTCGAGAAAT ACGATGCCGA CCCCGACACC CTGCTGATGA GCGGCATGGT CATGGTCGGC
GCGGTGGCGC TGCAGAAGCC GGCCGTCACC ATGGCCCAGG TGGCGCCGGT CGCGCGCCTC
ACCAGCGACT ACGAGGTGGT CGCCGTGAAG GCCGATTCGC CGATCAAGAC GCCGAAGGAC
CTGATCGCCC AGCTGCGCAC CGATGCGGCC AAGGCCGTCA TCGCGGGTGG CTCGGCCGGC
GGCGTGGACC ACATGTACGC CGGCATGCTG GCCCGCGTGG CCGGCAACAC CGCGGGCCTG
GTCTACCAGC CCTACCCGGG CGGCGCGCAG GTGGTGGAGG CGCTGGCCAC CGGCAAGGCG
GTGGCGGGCA TCTCGGGCTT CAGCGAGTTC AGCGCGGGTC TTTCCAACGG TACGCTGCGC
GCCATCGGCG TGTCGTCGAA GCGGCCGTTC CTGGGCATTC CGTCGGTGCG CGAGCAGGGC
GTGGACGCCG ACCTGGCCAA CTGGCGCGGC GTGCTCACCG GCAAGAAGGT GACGGCGGAG
CGCCGGGCCG TGCTGCTCGA GGCGGTGCAC CGCGCCACCA ACGCCGATGT CTGGCAGAAG
ACCATCAAGC GCAACAACTG GGACGCGTAC TGGATGGCGG GCAAGGATTT CGAGAGCTTC
CTCGAGCTGG ACCTGGCGAT GGCCGGGCCG ATGATCTACC TGCTCAAATT GAAGGCCTGA
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| Protein sequence | MAGAAAAAGA GPALLWPRLA GAAEPQLVSK LRIVIPANEG GGWDQTGRAL GAALLASGAA
GEVVYENIGG KGGTIGLAKY VEKYDADPDT LLMSGMVMVG AVALQKPAVT MAQVAPVARL
TSDYEVVAVK ADSPIKTPKD LIAQLRTDAA KAVIAGGSAG GVDHMYAGML ARVAGNTAGL
VYQPYPGGAQ VVEALATGKA VAGISGFSEF SAGLSNGTLR AIGVSSKRPF LGIPSVREQG
VDADLANWRG VLTGKKVTAE RRAVLLEAVH RATNADVWQK TIKRNNWDAY WMAGKDFESF
LELDLAMAGP MIYLLKLKA
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