| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4955 |
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| Symbol | |
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| ID | 7974237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5265974 |
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| End bp | 5267332 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795550 |
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| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
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| Protein accession | YP_002946825 |
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| Protein GI | 239817915 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01424] glutathione-disulfide reductase, plant |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.201124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACAT TCGACTTCGA TCTTTTCGTC ATCGGCGGCG GCAGCGGCGG CGTGCGCGCC
GCGCGCATGG CGGCCCAGCA GGGGGTGCGC GTGGGCCTGG CCGAGGCGGC CGACCTTGGC
GGCACCTGCG TCAACGTGGG CTGCATTCCG AAGAAGCTCT ACAGCTACGC GGCCGGCTAT
GCCGAATCCT TCGAGGAAGC CGCGGGCTAC GGCTGGCAGC TGCCGCAGGC GCCGCAGTTC
GACTGGGCGC ATCTCAAGGC GCAGCGCGCG AAGGAAATCA AGCGGCTCAA CGGCGTGTAT
GCCTCGCTGC TGAAGAATTC CGGCGTGGTG CTGGTCACCG GCTGGGCGCA GCTGCTCGAC
GGCCACACGG TCGAGGTCGA CGGCAAGCGC CACACCGCGC GCCATCTGCT GGTGGCCACC
GGCGGCACAC CCTACGTGCC CGACTTTCCG GGCCGCGAGC ACGTCGCCAC CTCCGATGCG
ATGTTCGACC TCGACCCGTT CCCCAAGCGC CTGCTGGTGG TGGGCGGCGG CTACATCGCC
TGCGAGTTCG CATCGATCTT CAACGGCCTG GGTGCCCAGG TGACGCAGCT GCACCGCCGC
GCGCACCTGC TCACCGGCTT CGACGACGAC GTGCGGCAGT TCCTTGCCAA CGAGATGGGC
AAGGCGGGCG TCGACGTGCG GCTGAACTGC GAGGCCGCCT CGATCACGCG CGGGGCGCAC
GGGCTCACGG TCACGCTCGA GCGCGGCCAG CAGATCGAAG CCGACACGGT GCTCTTTGCG
ACCGGCCGCG TGCCCAACAC CCAGGGGCTC GGCCTCGAAG CGGCGGGCGT GAAGCTCGAC
GAGCGCGGCG CCATCGCGGT CGATGCGCAC TACCGCAGCT CGGTGCCGTC GATCCATGCG
GTGGGCGACG TGTCCACGCG CGTGCAGCTC ACGCCGGTGG CGCTGGCCGA GGCGATGGTG
GTGGTCGACG AACTCTTCGG CAAGGGCCGG CGCCGGCTCG ACTACGAGTT CATTCCGACG
GCGGTGTTCA CGCACCCCAA CATCGGCACC TGCGGCTACA CCGAGCTCGA CGCGCGCGCG
AAGTTCGGCG ACGTGGCGGT GTTCTCGAGC GAATTCAAGT CGCTGCGCCA CACGCTGTCG
GGCCGCACCG AGCGCACCTT CATGAAGCTG GTGGTCGACA AGGCCAGCGA CCGCGTGGTG
GGCCTGCACA TGGTGGGCGC CGATGCGGGC GAGGTGGTGC AGGGCTTTGC CGTGGCGATG
CGCGCGGGCG CGACCAAGGC ACTGTTCGAC AGCACCATCG GCATCCACCC GACGGCGGCC
GAAGAGTTCG TGACGATGCG CGAACCCATG CCGGGCTAG
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| Protein sequence | MPTFDFDLFV IGGGSGGVRA ARMAAQQGVR VGLAEAADLG GTCVNVGCIP KKLYSYAAGY
AESFEEAAGY GWQLPQAPQF DWAHLKAQRA KEIKRLNGVY ASLLKNSGVV LVTGWAQLLD
GHTVEVDGKR HTARHLLVAT GGTPYVPDFP GREHVATSDA MFDLDPFPKR LLVVGGGYIA
CEFASIFNGL GAQVTQLHRR AHLLTGFDDD VRQFLANEMG KAGVDVRLNC EAASITRGAH
GLTVTLERGQ QIEADTVLFA TGRVPNTQGL GLEAAGVKLD ERGAIAVDAH YRSSVPSIHA
VGDVSTRVQL TPVALAEAMV VVDELFGKGR RRLDYEFIPT AVFTHPNIGT CGYTELDARA
KFGDVAVFSS EFKSLRHTLS GRTERTFMKL VVDKASDRVV GLHMVGADAG EVVQGFAVAM
RAGATKALFD STIGIHPTAA EEFVTMREPM PG
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