| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4947 |
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| Symbol | |
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| ID | 7974229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5255624 |
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| End bp | 5256394 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795542 |
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| Product | pantothenate kinase |
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| Protein accession | YP_002946817 |
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| Protein GI | 239817907 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCC CCTTCCTCGC GATCGACATC GGCAATACCC GCCTCAAATG GGCGCTCTAC
GATGCGGCGC ATCCGGGGGC CGCGCTGCAG GCGCATGGCG CGGAGTTCCT CGACCACATC
GAACGGCTGG CCGACGGCCC CTGGGCCGAC CTGCCCGCGC CCGGCTCCAT GCTCGGCTGC
GTGGTGGCCG GCGACGCGGT GCGCCGCCGC GCCGAGGAGC AGATCGTCGA ACGCTTCGAC
TGCGCGCCGC GCTGGGTGGT GTCGAGCGCC GCCGAGGCCG GCATCGTCAA TGGCTACGAC
CATCCCACGC GGCTGGGCGC CGACCGCTGG GTGGCGATGA TCGGCGCGCG CCACCGGATG
CTGGACGCGG GGCCGGCGCG GCCGATGGTG GTGGTGATGA TCGGCACCGC CGTGACGGTC
GAGGCCATCG ATGCCGGCGG CAAGTTCCTG GGCGGACTGA TCCTGCCGGG CCACGGCATC
ATGCTGCGCG CACTGGAGTC GGGCACCGCG GGCCTGCACG TGCCGACCGG CGAGGTGCGC
GAATTCCCCA CCAACACCAG CGACGCGCTC ACCAGCGGGG GTACCTATGC CATTGCCGGT
GCAGTCGAGC GCATGGTGCA GCATGTGCGC TCGCACTGCG GCGCCGAGCC GGCCTGCTAC
ATGACCGGCG GCGCGGGCTG GAAGATGGCG CCCGTGATGA ACGGGCATTT CGAACTGGTC
GAAAGCCTGA TCATGGACGG CCTGCTGGTG ATCGCCCAGG CGCGGGGCTG A
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| Protein sequence | MASPFLAIDI GNTRLKWALY DAAHPGAALQ AHGAEFLDHI ERLADGPWAD LPAPGSMLGC
VVAGDAVRRR AEEQIVERFD CAPRWVVSSA AEAGIVNGYD HPTRLGADRW VAMIGARHRM
LDAGPARPMV VVMIGTAVTV EAIDAGGKFL GGLILPGHGI MLRALESGTA GLHVPTGEVR
EFPTNTSDAL TSGGTYAIAG AVERMVQHVR SHCGAEPACY MTGGAGWKMA PVMNGHFELV
ESLIMDGLLV IAQARG
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