| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4944 |
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| Symbol | |
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| ID | 7974226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5252562 |
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| End bp | 5253410 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795539 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_002946814 |
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| Protein GI | 239817904 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTC AGACCGTCGG CATCATCGGC GCCGGAACAA TGGGCAACGG CATTGCGCAG
GCCTGCGCGG TGTCGGGCGT CAACGTGGTG ATGATCGATG TCGCCCAGGC GGCGGTCGAC
AAGGGCCTGG CCACCGTCTC GGGCAGCCTG GACCGCCTGA TCAAGAAGGA AAAGCTCACG
GCCGAGCAGA AGGCCGCCGC GCTTGCGCTG ATCAAGGGCT CGACCGATTA CAACGACCTG
AAGGGCGCGC AGCTGGTGAT CGAGGCCGCC ACCGAGAACC ACGCACTCAA GCTCAAGATC
CTCAAGCAGG TCGACGAACT GGTGGCGCCC GAGGTGATCA TCGCCTCCAA CACCTCGTCG
ATCTCGATCA CGCAGCTCGC AGCCGCCACC TCGCGCCCCG ACCGCTTCAT CGGCATGCAC
TTCTTCAACC CGGTGCCGAT GATGGCGCTG GTGGAGCTGA TCCGCGGCTA TCTCACGAGC
GACGCCACGC ACGATGCCGT CAAGGCGCTG GCCGAGAAGC TGGGCAAGTC GCCCATCACC
GTGAAGAACG CGCCGGGCTT CGTGGTCAAC CGCATCCTGG TGCCGATGAT CAACGAGGCT
TTCTTCGTGC TGTCCGAAGG CATCGCCACG GCCGAGGACA TCGACGCCGG CATGAAGCTG
GGCTGCAACC AGCCGATCGG CCCGCTGGCG CTGGCCGACA TGATCGGCCT GGACGTGTGC
CTGGCCGTGA TGGAGGTGTA CCTCGAGCAG TTCGGCGACT CCAAGTACCG GCCGTGCCCG
CTGCTCAAGG AAATGGTCGC TGCGGGCCAG CTCGGCCGCA AGACCGGCCG CGGTGTCTAC
ACCTACTGA
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| Protein sequence | MTIQTVGIIG AGTMGNGIAQ ACAVSGVNVV MIDVAQAAVD KGLATVSGSL DRLIKKEKLT
AEQKAAALAL IKGSTDYNDL KGAQLVIEAA TENHALKLKI LKQVDELVAP EVIIASNTSS
ISITQLAAAT SRPDRFIGMH FFNPVPMMAL VELIRGYLTS DATHDAVKAL AEKLGKSPIT
VKNAPGFVVN RILVPMINEA FFVLSEGIAT AEDIDAGMKL GCNQPIGPLA LADMIGLDVC
LAVMEVYLEQ FGDSKYRPCP LLKEMVAAGQ LGRKTGRGVY TY
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