| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4940 |
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| Symbol | |
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| ID | 7974222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5248327 |
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| End bp | 5249202 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795535 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946810 |
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| Protein GI | 239817900 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC TCCAACTCCT GCTGTCGGGC ATTGCGCAAG GTTGCATCTA CGGGCTGATC
GCACTGGGCT TCGTGCTGAT CTACAAGGCC ACCGAAACCG TGAGCTTCGC GCAGGGCGAC
CTGATGATGC TCGGCGCCTT CGGTGCGTTT GCCGGCATGT CGCCGTTCGG TCTGCCGTTC
TGGCTCGCGG CGCTGCTGGC GGTGATGGCG ATGGCGGCCT TCGGCGTGCT GCTCGAGCTG
GTGGTGATCC GCCCGATCCT CGGCCAGCCG CAGTTCTCCA TCGTGATGCT GACCATCGGC
ATCGCCTACG TGGCGCGCGG GCTCATCACC ATGGTGCCGG GCATCGGCAC CGACACCCAC
ACGCTGCCGG TGCCCTACAA GGACCAGATC TGGAAGCTGG GCGGGCTGGT GGTCAACCTC
GAACAGCTCG CGATCATCGT TGCCACCGCC ATCCTGTGCG GCCTGCTGTT CGCGATGTTC
CGCTACAGCA AGCTCGGCAT CGCGATGCAG GCCTCGTCGC AGAACCAGCT CGCGGCGTAC
TACATGGGCA TTCCGGTGAA GCGCCTGAAC GGGTTGGTTT GGGGGCTCGC GGCCGCGGTC
GCAGCCATAG CCGGCATGCT GCTCGCGCCC ATCACCTTCG TGCACGCGAA CATGGGCTTC
ATCGGGCTCA AGGCCTTTCC GGCCGCGGTG GTGGGCGGCT TCGGCAGCCT GCCGGGCGCG
ATCGTCGGCG GGCTGGTGAT CGGCATCGTC GAATCGTTCG CGGGCTTCTA CCTGCCCGAC
GGCTTCAAGG ACACGGCCCC GTACATCGTG GTGCTGCTGA TGCTGATGAT CAAGCCCAAC
GGCCTGTTCG GCGAGAAGCT GCGCAAGAAA GTCTAG
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| Protein sequence | MQILQLLLSG IAQGCIYGLI ALGFVLIYKA TETVSFAQGD LMMLGAFGAF AGMSPFGLPF
WLAALLAVMA MAAFGVLLEL VVIRPILGQP QFSIVMLTIG IAYVARGLIT MVPGIGTDTH
TLPVPYKDQI WKLGGLVVNL EQLAIIVATA ILCGLLFAMF RYSKLGIAMQ ASSQNQLAAY
YMGIPVKRLN GLVWGLAAAV AAIAGMLLAP ITFVHANMGF IGLKAFPAAV VGGFGSLPGA
IVGGLVIGIV ESFAGFYLPD GFKDTAPYIV VLLMLMIKPN GLFGEKLRKK V
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