| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4939 |
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| Symbol | |
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| ID | 7974221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5247156 |
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| End bp | 5248232 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795534 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946809 |
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| Protein GI | 239817899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.408733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCA TCTTCAAGAC CAGCTACGAC CAGGACATCC GCCTCGCGCG GCACGGCGGC
CATGTGTTCT GGTACGGCCT GCTCGCCGCG TTTCTCGTCG TCGCACCCTG GACGATCGAC
GAGTACTGGC TCGCGCAGCT GACCTTCGTG CTGATCTACG GCATCGTCGG CCTGGGCCTG
ATGCTGCTCG CGGGCTTCAC GGGGCAGTTC TCGATCGGGC ATGCGGCGTT CCTTGGCACG
GGCGCCTACA CGCAAGGCGT GCTGACGAAC CTGGGTGTGC CGTTTCCGAT TGCGCTGCTC
GCGGCCGCGG CGCTGTCGGC GGCGGTAGGC GTGGTGGTCG CGCTGCCGGC CCTGCGCGTG
AAGGGCATCT ACCTGGGCAT CGCCACGCTG TCGTTCGGCT TCATCGTGGA GGAAGTGTTC
GCGCGCTGGG AGAGCGTGAC GGGCGGCAAC GCGGGGCTGC ATGTGAAGTC GCCGCAGCTC
TTCGGCTGGT CGCTCGGGTC GGGCAACGGC TTCTACTTCT TGTGCCTGGT GGTGGCGGTG
CTCGGCACGC TCGGCATCCT GAACCTGCTG CGTTCGCCGA CCGGCCGCGC CTTCGTCGCG
ATCCGCGATT CGGAGATCTC GGCGCAGAGC ATGGGCATTC ACCTGGCGCG CTACAAGACG
ATGTCGTTCG CGATCTCGGC CGCGCTCGCG GGCCTGGGCG GCGCGCTGTA TGCGCACAAG
CTGAGCTTCA TCTCGCCGGA CCAGTTCAAC ATCCTGCAGT CGATCGACCT GCTGCTGATG
GTGGTGATTG GCGGCCTGGG CTCGGTGCAT GGCGCGTTCC TGGGCGCGAT CTTCCTGATT
GCGATGCCGC AGCTGATCTC GATGGGCAAG GACTGGCTGC CGGCCGTGAT CGGCCAGGCG
CCGGGGTTGC AGGGGCTGGT GTACGGCGTG GTGCTGATCG CCTTCGTGCT GTTCGAGCCG
CTGGGGCTGT ACGGCCGCTG GCTCAAGATC CGTACCTGGC TGCAGCTCTT TCCGTTCTAC
CGCAAGGGCC TGTTCAAGCG GCAGAAGTCG TTCACCAAGT CGGACCGCCT GAGATGA
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| Protein sequence | MRFIFKTSYD QDIRLARHGG HVFWYGLLAA FLVVAPWTID EYWLAQLTFV LIYGIVGLGL
MLLAGFTGQF SIGHAAFLGT GAYTQGVLTN LGVPFPIALL AAAALSAAVG VVVALPALRV
KGIYLGIATL SFGFIVEEVF ARWESVTGGN AGLHVKSPQL FGWSLGSGNG FYFLCLVVAV
LGTLGILNLL RSPTGRAFVA IRDSEISAQS MGIHLARYKT MSFAISAALA GLGGALYAHK
LSFISPDQFN ILQSIDLLLM VVIGGLGSVH GAFLGAIFLI AMPQLISMGK DWLPAVIGQA
PGLQGLVYGV VLIAFVLFEP LGLYGRWLKI RTWLQLFPFY RKGLFKRQKS FTKSDRLR
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