| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4937 |
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| Symbol | |
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| ID | 7974219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5245077 |
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| End bp | 5245850 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795532 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946807 |
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| Protein GI | 239817897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.337633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACG TCGTCCTCCA ACTGCTCAAC GTCGAAAGCG CCTACGGCCC CATCAAGGCC
ATCCGCGGCG TGAGCCTGAA AGTCAGGCAG GGCGAAATAG TGACCGTCCT GGGTTCGAAT
GGCGCCGGAA AAACGACCAT CCTGAAAACG ATCTCCGGAA TCATCGACCC GAGAAAGGGC
AGCATCGAAT TCCAGGGCAA GGACATCACC GCCAAGGACC CGGCCCACAT CGTCCAGCAG
GGCCTGAGCC ATGTGCCCGA AGGCCGCGAG GTGTTCCCGC TGCTGTCGGT GAAGGACAAC
CTGCTGATGG GCGCCTACAC CCGCAAGGAC CGCGACGGCG TGGCGCGTGA CATCGAGAGC
GTCTATGCCT ACTTTCCGAT CCTGCGCGAG CGCGCCACGC AGGACGCCGG CCTGCTCTCG
GGCGGCCAGC AGCAGATGCT CGCCATCTCG CGCGCCATCA TGGCCGCGCC GCATCTCATC
CTGCTCGACG AACCCAGCCT CGGCCTCAGC CCCAAGCTGA CGAAGGAGAT CTTCGAGATC
GTCGTGCGCA TCAACCGCGA ACGCGGCACC ACCATTCTGC TGGTCGAGCA GAACGCCAAC
ATGGCGCTCA ACGCCTCCGA CCACGGCTAC GTGCTCGAGA ACGGCCGCAT CGTCATGGAA
GACACCTGCG AACGCCTGCG CGAGAAAGAA GACATCAAGG AGTTCTACCT CGGCGTCAAG
GACGACGGCG TGCGCGGCGA GCGGCGCTGG AAAAAGAAGA AGACCTGGAG ATGA
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| Protein sequence | MTDVVLQLLN VESAYGPIKA IRGVSLKVRQ GEIVTVLGSN GAGKTTILKT ISGIIDPRKG
SIEFQGKDIT AKDPAHIVQQ GLSHVPEGRE VFPLLSVKDN LLMGAYTRKD RDGVARDIES
VYAYFPILRE RATQDAGLLS GGQQQMLAIS RAIMAAPHLI LLDEPSLGLS PKLTKEIFEI
VVRINRERGT TILLVEQNAN MALNASDHGY VLENGRIVME DTCERLREKE DIKEFYLGVK
DDGVRGERRW KKKKTWR
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