Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4933 |
Symbol | |
ID | 7974215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5240706 |
End bp | 5241359 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644795528 |
Product | multiple antibiotic resistance (MarC)-related protein |
Protein accession | YP_002946803 |
Protein GI | 239817893 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.19467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCT CGATGGACCT GATCAAGCCG CTGGTCACGC TGGTGGCCAT CGTCAACCCG CTGGCCATCG TGCCCTTCTT CATCCACTAC ACGCAGGGAT ATTCCGATGC GCAGCGCCGG CACACGGTGC GCATGTCGGC CTTCAGTGCC TTCGTGGTGA TTGCGGTCAG CGCGCTGATC GGACTGCAGC TGCTGGCGTT CTTCGGCATC TCGATTGCCA GCTTCCAGGT GGGCGGCGGC CTGCTGCTGC TCATGAGCTC GCTGTCGATG CTCAACGCCA AGCCGGCCGA GAGCAAGACC AACGTCGAGG AGCTGCGCGC CACCGAGGTG AAAGCCTCGA TGGGCGCATC GATCGCGGTG GTGCCGCTGA CCATTCCGCT GCTCACCGGG CCGGCCACCA TATCGACCGT GGTGATCTAT GCCGACAAGA CGCAGCACCT GTGGGAGCTC GGGCTCCTGG TGGGCTATGG CGTGGTGGTG GCGCTGGCCA CCGCGCTGGC GTTTTCGCTC GCGCAGCCGA TTGCGCGCGT GCTTGGCAAG ACGGGCATCA ACATCATGAC GCGGCTCATG GGCCTTATCC TCGCGGCGCT CGCGGTCGAG GTCATGGCCG ACGGCCTGGG CAAGCTGTTT CCGATCCTGC AGCGCGTGGG CTGA
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Protein sequence | MSTSMDLIKP LVTLVAIVNP LAIVPFFIHY TQGYSDAQRR HTVRMSAFSA FVVIAVSALI GLQLLAFFGI SIASFQVGGG LLLLMSSLSM LNAKPAESKT NVEELRATEV KASMGASIAV VPLTIPLLTG PATISTVVIY ADKTQHLWEL GLLVGYGVVV ALATALAFSL AQPIARVLGK TGINIMTRLM GLILAALAVE VMADGLGKLF PILQRVG
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