Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4931 |
Symbol | |
ID | 7974213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5239213 |
End bp | 5239812 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795526 |
Product | DSBA oxidoreductase |
Protein accession | YP_002946801 |
Protein GI | 239817891 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.11555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGA CGATCGACTA CTACTTTGCG CCACAGAGCC CGTGGACCTA TCTGGGGCAT TCCCGCTTTG CCGCGATCGC CGCGGCCGCC GGCGCCACGG TGCGCGTGCG GCCGATCGAC CTGGGCAGCG TGTTCCCGGT GTCGGGCGGG CTGCCGCTGG GCAAGCGCGC GCCGCAGCGC CAGGCCTACC GGCTGGTCGA CCTCGCACGC TGCTCGCGCC ACCTGGGCCT GCCGCTGAAC ACCAAGCCGA AGTTCTTTCC GGTGGCCAGC GACGACGCGG CCCGGGTCAT CATCGCGGTC GACATGCACG ACGGCACCGA GGCCGCCATG CGCATGTGCG CGGCGGTGTT CGCGGCCGTG TGGGTGCAGG AGCGCAACAT CGGCGACCCG AAGGTGCTCG ATTCGCTGGT GGTCGAATGC GGGCTGTCGC CCAAGCGCGC GGAGCAGTCG CAGAGCCAGG CGGTGCAGGA GCGTTACGAG GCTTACACGC AGGAAGCGAT CGACATCCAG GTGTTCGGTG CGCCAAGCTA TGTCATCGAT GGCGAGATAT TCTGGGGCCA GGACCGGCTC GACTTCGTCG AACGCGCGCT GCGCCAGTAG
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Protein sequence | MHKTIDYYFA PQSPWTYLGH SRFAAIAAAA GATVRVRPID LGSVFPVSGG LPLGKRAPQR QAYRLVDLAR CSRHLGLPLN TKPKFFPVAS DDAARVIIAV DMHDGTEAAM RMCAAVFAAV WVQERNIGDP KVLDSLVVEC GLSPKRAEQS QSQAVQERYE AYTQEAIDIQ VFGAPSYVID GEIFWGQDRL DFVERALRQ
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