| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4930 |
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| Symbol | |
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| ID | 7974212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5238489 |
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| End bp | 5239172 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795525 |
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| Product | Carboxymethylenebutenolidase |
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| Protein accession | YP_002946800 |
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| Protein GI | 239817890 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0665407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCAAT TCATCGATCT GAAAGCCAAG GACGGCTTCA CCTTTCCCGC CTACGTGGCC
GAGCCCGCCG GCAAGCCGCG CGGCGCGGTG GTCGTGGTGC CGGAGATCTT CGGCGTCAAC
TCGCACATCC GCTCGGTGGC CGACGGCTAC GCGGCGGACG GCTACCTGGC GGTGTCGCCC
TCGACCTTCC ATCGCGTGAA GCCCGGCGTC GAGCTCGGCT ACAGCGACGA GGACATGAAG
GCCGGCTTCG CGCTGAAGAC CGCGGTCGAG GCGCTGCCCG CGCCCGGCGT GCTGCAGGAC
ATCGAGGCCG CCGTGGCCTA TGCCTCCAAG GCCGGCAAGG TCGGCATCGT GGGCTATTGC
TGGGGCGGCC TCCTGGTCTG GCGCGCCGCC AGCCTGGTTC CGGGCATTGC CGCCGCGGCA
CCCTACTACG GCGGCGGCAT GACCACGCCG GAAGAAACCG CGCGCCAGCC CAAGGTGCCG
GTGCTCGCGC ACTTCGGCAA CCAGGACCAC TGGATTCCGC TGGACACCAT CGAGACCTTC
AAGAAGGCGC ATCCCGAGGT GCAGGTGCAC GTCTACGAAT CGGGCCACGG CTTCAACTGC
GACCAGCGCG GCTCCTACAA CGCCGAGGCC GCCAAGCTCG CGCGCACGCG CACGCTCGAG
TTCTTCGCCA AGCACGTCGG CTGA
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| Protein sequence | MGQFIDLKAK DGFTFPAYVA EPAGKPRGAV VVVPEIFGVN SHIRSVADGY AADGYLAVSP
STFHRVKPGV ELGYSDEDMK AGFALKTAVE ALPAPGVLQD IEAAVAYASK AGKVGIVGYC
WGGLLVWRAA SLVPGIAAAA PYYGGGMTTP EETARQPKVP VLAHFGNQDH WIPLDTIETF
KKAHPEVQVH VYESGHGFNC DQRGSYNAEA AKLARTRTLE FFAKHVG
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