| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4929 |
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| Symbol | |
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| ID | 7974211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5237560 |
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| End bp | 5238465 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795524 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946799 |
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| Protein GI | 239817889 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00665073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAGTC TCGATCTGAT CAGAACCTTC CGGGAAGTGG CCTCGCATGG CAGCTTCTCG
CACGCGGCCA AGAAGCTCGA CATGTCGAAG GCGACGGTCA GCAAGTACGT GGCGGAGCTC
GAAACGCGCT TCGGCGTGCG CCTTCTCAAC CGCTCCACGC GTTCCGTGAG CCTGACCGAT
GCCGGGCAGC TGCTGCTCGA GCGCAGCACC CCGGTGCTCG AAATGGTGGA GCTCACGCAG
GCCGAGCTGC AGGAGCGCGC CAGGCAGCCC GGCGGCCGGC TGCGGATTTC GGCGCCGCAC
GGCATGGGCA ACGGCGAGTT TCCGGGCCTT TTGGCCGACT TCATGCGCTA CTACCCGGAC
GTGAGCATCA GCCTGCAGCT GACCAACCGC ACGGTCGACC TGGCGGAAGA AGGCATCGAC
GTCGACATCC GCAGCGGCCC GGTGGCGGAC GCCAACCTGA TCGTGCGCAA GCTGATGCTG
ATGGAGATGG TGGTCTGCGC CTCGCCGGTC TACTGGAAGA AGCACGGCAA GCCCGGGCAT
CCGCGCGACC TTGCGGCACA CGAGGCGCTC ACGCATTCGC TGCTGGGCGC CCAGCCGGTC
TGGCGCTTCG ACGACGGCGG CGAGCCGCTG GACGTGCCGG TGAAAAGCCG CATGGACTGC
ACCGAGGGCG CGCCGCTGAT CCGGGTGGCG ATGCGCGGCT TCGGCGTGAT CTACCTGCCC
TCGATCCTGG TGCAGTCGCA CATCGACCAC GGTGAACTGG TGCCGGTGCT GCAGGGCTAT
GCGCGCAAGG ACATGTGGCT GTCGGCGGCC TACCTGCAGC GGCGCCACAA CAGCGCCGCG
CTGCGTGCGC TGCTCGACTT TCTGCAGACC CGCGTCGGCA AAGGGCCGGG CTCCCCCAAA
AAATAG
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| Protein sequence | MDSLDLIRTF REVASHGSFS HAAKKLDMSK ATVSKYVAEL ETRFGVRLLN RSTRSVSLTD
AGQLLLERST PVLEMVELTQ AELQERARQP GGRLRISAPH GMGNGEFPGL LADFMRYYPD
VSISLQLTNR TVDLAEEGID VDIRSGPVAD ANLIVRKLML MEMVVCASPV YWKKHGKPGH
PRDLAAHEAL THSLLGAQPV WRFDDGGEPL DVPVKSRMDC TEGAPLIRVA MRGFGVIYLP
SILVQSHIDH GELVPVLQGY ARKDMWLSAA YLQRRHNSAA LRALLDFLQT RVGKGPGSPK
K
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