Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4923 |
Symbol | |
ID | 7974205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5232387 |
End bp | 5232740 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644795518 |
Product | ferredoxin-like protein |
Protein accession | YP_002946793 |
Protein GI | 239817883 |
COG category | [C] Energy production and conversion |
COG ID | [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00479937 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGTT CCTCTTCTGC CGCGCCGCGC GGCTATTACG GCCGCCACAT CTTCTTTTGC CTGAACGAGC GCAAGAACGG CGAAGACTGC TGCGCCCTGC ACAACGCCCA GGCGGGTTTC GACCGCTGCA AGGCGAAGGT CAAGGAGGCG GGGCTGGCCG GTCCCGGCAA GGTGCGCGTC AACAAGGCGG GCTGCCTGGA CCGCTGCGCC GGCGGCCCGG TGGCGGTGGT CTATCCCGAA GCGGTCTGGT ACACCTTCGT CGACGCCGAC GACATCGACG AGATCGTCGA CTCGCACCTG AAGAACGGCC AGGTCGTCGA GCGCCTGCTG CTGCCTCCCG ATGTGGGCCG CTGA
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Protein sequence | MPSSSSAAPR GYYGRHIFFC LNERKNGEDC CALHNAQAGF DRCKAKVKEA GLAGPGKVRV NKAGCLDRCA GGPVAVVYPE AVWYTFVDAD DIDEIVDSHL KNGQVVERLL LPPDVGR
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