Gene Vapar_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4923 
Symbol 
ID7974205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5232387 
End bp5232740 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID644795518 
Productferredoxin-like protein 
Protein accessionYP_002946793 
Protein GI239817883 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00479937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGTT CCTCTTCTGC CGCGCCGCGC GGCTATTACG GCCGCCACAT CTTCTTTTGC 
CTGAACGAGC GCAAGAACGG CGAAGACTGC TGCGCCCTGC ACAACGCCCA GGCGGGTTTC
GACCGCTGCA AGGCGAAGGT CAAGGAGGCG GGGCTGGCCG GTCCCGGCAA GGTGCGCGTC
AACAAGGCGG GCTGCCTGGA CCGCTGCGCC GGCGGCCCGG TGGCGGTGGT CTATCCCGAA
GCGGTCTGGT ACACCTTCGT CGACGCCGAC GACATCGACG AGATCGTCGA CTCGCACCTG
AAGAACGGCC AGGTCGTCGA GCGCCTGCTG CTGCCTCCCG ATGTGGGCCG CTGA
 
Protein sequence
MPSSSSAAPR GYYGRHIFFC LNERKNGEDC CALHNAQAGF DRCKAKVKEA GLAGPGKVRV 
NKAGCLDRCA GGPVAVVYPE AVWYTFVDAD DIDEIVDSHL KNGQVVERLL LPPDVGR