| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4919 |
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| Symbol | |
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| ID | 7971613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5229265 |
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| End bp | 5229738 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795514 |
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| Product | 30S ribosomal protein S7 |
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| Protein accession | YP_002946789 |
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| Protein GI | 239817879 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0049] Ribosomal protein S7 |
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| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.204704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCACGTC GTCGCGAAGT CCCCAAACGT GAAATCCTGC CGGATCCCAA GTACGGCAAT
GTCGAGCTGT CGAAGTTCAT GAACGTGATC ATGGAAGGCG GCAAGAAGGC TGTTGCCGAG
CGCATCATTT ATGGCGCGCT CGACTTCATC GAAAAGAAGA ACCCCGACAA GGACCCGCTC
GAGGCCTTCA CCGTTGCCAT CAACAACGTG AAGCCGATGG TCGAAGTCAA GTCGCGCCGC
GTCGGTGGTG CGAACTACCA GGTGCCGGTC GAAGTCCGCC CGGTCCGCCG CCTCGCCCTG
TCGATGCGCT GGATCAAGGA AGCCGCCCGC AAGCGCGGTG AGAAGTCGAT GGCCCTGCGC
CTGGCCAACG AGCTGATGGA AGCCACGGAA GGCCGTGGCG GCGCCATGAA GAAGCGCGAC
GAAGTGCACC GCATGGCAGA AGCCAACCGG GCATTCAGCC ACTTCCGCTT CTAA
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| Protein sequence | MPRRREVPKR EILPDPKYGN VELSKFMNVI MEGGKKAVAE RIIYGALDFI EKKNPDKDPL
EAFTVAINNV KPMVEVKSRR VGGANYQVPV EVRPVRRLAL SMRWIKEAAR KRGEKSMALR
LANELMEATE GRGGAMKKRD EVHRMAEANR AFSHFRF
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