| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4918 |
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| Symbol | |
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| ID | 7971612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5227069 |
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| End bp | 5229168 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795513 |
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| Product | translation elongation factor G |
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| Protein accession | YP_002946788 |
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| Protein GI | 239817878 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.935867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA AGACCCCCAT CGAGCGCTAC CGCAACATCG GCATCTCCGC GCACATCGAC
GCCGGCAAGA CCACGACGAC CGAGCGCATC CTGTTCTACA CCGGTGTGAA CCACAAGATC
GGTGAAGTGC ACGATGGCGC CGCCACGATG GACTGGATGG AGCAAGAGCA AGAGCGTGGC
ATCACGATCA CCTCGGCTGC CACCACCTGC TTCTGGAAGG GCATGGCCGG CAAGTTCGAA
GAACACCGCA TCAACATCAT CGACACCCCC GGCCACGTGG ACTTCACCAT TGAAGTCGAG
CGCTCGATGC GCGTGCTGGA CGGCGCCGTC ATGGTGTACG ACGCGGTCGG CGGCGTGCAG
CCCCAGTCGG AAACCGTCTG GCGCCAGGCC AACAAGTACA AGGTTCCGCG CCTCGCGTTC
GTCAACAAGA TGGACCGCAC CGGCGCCGAC TTCCTGCGCG TGCGCCAGAT GATGGTGGAC
CGCCTGAAGG CCAACCCCGT CGTGATCCAG ATCCCGATCG GTGCCGAAGA GCACTTCCAG
GGCATCGTCG ACCTCGTGAA GATGAAGGCC ATCATCTGGG ACGAAGACAA GGGCGTGACC
TTCACCTACG GTGAAATCCC CGCGAACCTG ACCGACGTCT GCAACGAATA CCGCGAAAAG
CTCGTCGAAG CCGCTGCCGA AGCGAGCGAA GAGCTGATGA ACAAGTACCT CGAAGGCGGC
GAGCTGTCCG AAGAGGAAAT CAAGAAGGCC ATTCGCCAGC GCACCATCGC CGGCGAAATC
CAGCCGATGC TGTGCGGCTC GGCCTTCAAG AACAAGGGCG TGCAGGCCAT GCTCGACGCC
GTCGTCGAAT ACATGCCCGC TCCGACCGAC ATTCCGCCGG TCAACGGCAC CGACGAAGAC
GAAGCCCCCG TCACCCGCAA GGCTGACGAC AACGAGAAGT TCTCGGCGCT CGCATTCAAG
CTGATGACCG ACCCGTTCGT GGGCCAGCTG ACCTTCGTGC GCGTCTACTC GGGCGTGCTG
ACCAAGGGCG ACAGCGTCTA CAACCCGGTG CGCGGCAAGA AGGAGCGCAT CGGCCGTATC
GTGCAGATGC ACGCGAACAA CCGCGAAGAA GTCAACGAAA TCCGCGCCGG CGACATCGCT
GCCTGCGTGG GCCTGAAGGA AGTCACCACG GGCGAAACCC TGTGCGACCC GGCAGCCGTC
GTGACGCTCG AGCGCATGGT TTTCCCGGAA TCGGTGATCT CGCAGGCCGT CGAGCCCAAG
ACCAAGGCCG ACCAGGAAAA GATGGGCATC GCCCTGCAGC GCCTTGCCCA GGAAGACCCG
TCGTTCCGCG TCAAGACCGA CGAGGAATCG GGCCAGACCA TCATCGCCGG CATGGGCGAG
CTGCACCTCG AAATCATCGT GGACCGCATG AAGCGCGAGT TCGGCGTGGA AGCCAACGTG
GGCAAGCCGC AGGTGGCCTA CCGCGAAACG ATCCGCAAGA CCGTCGAGGA AGCCGAAGGC
AAGTTCGTGC GCCAGTCGGG CGGCAAGGGC CAGTACGGCC ACGTCGTGCT CAAGCTCGAG
CCGCAGGAAG CCGGCAAGGG CTTCGAATTC GTCGACGCCA TCAAGGGCGG TGTGGTTCCT
CGCGAATACA TCCCCGCAGT GGAAAAGGGC GTTGTGGAAG CACTGACGCA AGGCGTGCTG
GCGGGCTACC CCGTCGTCGA CGTCAAGGTC ACGCTGCACT TCGGCTCGTA CCACGACGTG
GACTCGAACG AAATGGCGTT CAAGATGGCC GCGATCTTCG GTTTCAAGGA AGGCGCCCGC
AAGGCCAACC CCGTGATCCT CGAGCCGATG ATGGCCGTGG AAGTCGAAAC GCCTGAAGAC
TACGCCGGCA ACGTGATGGG CGACCTCTCG TCACGCCGCG GCATGGTGCA GGGCATGGAC
GACATGATCG GTGGCGGCAA GTCCATCAAG GCCGAAGTGC CGCTGTCGGA AATGTTCGGC
TACTCGACCA CGCTGCGTTC GATGTCGCAA GGCCGCGCCA CGTACACGAT GGAGTTCAAG
CACTACGCCG AAGCTCCGCG CAACGTTGCC GAAGCCATCG TGGCTGCTCG CGCAAAGTAA
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| Protein sequence | MSRKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTC FWKGMAGKFE EHRINIIDTP GHVDFTIEVE RSMRVLDGAV MVYDAVGGVQ
PQSETVWRQA NKYKVPRLAF VNKMDRTGAD FLRVRQMMVD RLKANPVVIQ IPIGAEEHFQ
GIVDLVKMKA IIWDEDKGVT FTYGEIPANL TDVCNEYREK LVEAAAEASE ELMNKYLEGG
ELSEEEIKKA IRQRTIAGEI QPMLCGSAFK NKGVQAMLDA VVEYMPAPTD IPPVNGTDED
EAPVTRKADD NEKFSALAFK LMTDPFVGQL TFVRVYSGVL TKGDSVYNPV RGKKERIGRI
VQMHANNREE VNEIRAGDIA ACVGLKEVTT GETLCDPAAV VTLERMVFPE SVISQAVEPK
TKADQEKMGI ALQRLAQEDP SFRVKTDEES GQTIIAGMGE LHLEIIVDRM KREFGVEANV
GKPQVAYRET IRKTVEEAEG KFVRQSGGKG QYGHVVLKLE PQEAGKGFEF VDAIKGGVVP
REYIPAVEKG VVEALTQGVL AGYPVVDVKV TLHFGSYHDV DSNEMAFKMA AIFGFKEGAR
KANPVILEPM MAVEVETPED YAGNVMGDLS SRRGMVQGMD DMIGGGKSIK AEVPLSEMFG
YSTTLRSMSQ GRATYTMEFK HYAEAPRNVA EAIVAARAK
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