| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4916 |
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| Symbol | rpsJ |
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| ID | 7971610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5225344 |
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| End bp | 5225658 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644795511 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002946786 |
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| Protein GI | 239817876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACCA AGCAAAAAAT CCGCATCCGC CTGAAGGCGT TCGACTACAA GCTGATCGAC
CAGTCGGCAG CCGAAATCGT TGATACCGCC AAGCGCACCG GCGCGATCGT CAAGGGCCCC
GTGCCCCTGC CGACCCGCAT GAAGCGTTTC GACATCCTGC GTTCGCCGCA CGTCAACAAG
ACTTCGCGCG ACCAGCTCGA GATCCGCACG CACCAGCGCC TGATGGACAT CGTCGACCCG
ACCGACAAGA CCGTGGACGC GCTGATGAAG CTCGACCTGC CGGCCGGCGT GGACGTCGAG
ATCAAGCTGC AGTAA
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| Protein sequence | MATKQKIRIR LKAFDYKLID QSAAEIVDTA KRTGAIVKGP VPLPTRMKRF DILRSPHVNK
TSRDQLEIRT HQRLMDIVDP TDKTVDALMK LDLPAGVDVE IKLQ
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