| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4909 |
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| Symbol | rpsS |
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| ID | 7971603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5220040 |
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| End bp | 5220318 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644795504 |
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| Product | 30S ribosomal protein S19 |
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| Protein accession | YP_002946779 |
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| Protein GI | 239817869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0185] Ribosomal protein S19 |
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| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00546448 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCGCT CTCTCAAAAA GGGTCCGTTT GTTGACCATC ACCTCGTGGC CAAGGCCGAC
AAGGCCGTGA CGACGAAGGA CAAGAAGCCG ATCAAGACCT GGTCGCGCCG CTCGATGGTC
CTGCCCGAGT TCATCGGCCT GACCATTGCC GTGCACAACG GCAAGCAGCA CGTGCCTGTC
TACATCACCG ACCAGATGGT CGGCCACAAG CTCGGCGAAT TTGCGCTCAC GCGCACGTTC
AAGGGGCACC CCGCGGACAA GAAAGTCCAG AAGAAGTAA
|
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| Protein sequence | MTRSLKKGPF VDHHLVAKAD KAVTTKDKKP IKTWSRRSMV LPEFIGLTIA VHNGKQHVPV
YITDQMVGHK LGEFALTRTF KGHPADKKVQ KK
|
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