| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4908 |
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| Symbol | rplV |
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| ID | 7971602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5219698 |
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| End bp | 5220030 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644795503 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_002946778 |
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| Protein GI | 239817868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00527898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA CACGTGCAGT CCTCCGCGGT GTCCGCCTCT CGGTCGACAA GGGCCGTCTG
GTCGCTGACC TGATCCGCGG CAAGAAGGTT GATCAAGCGC TCAACGTCCT GCAATTCACG
CAGAAGAAGG CCGCTGTGAT CATCAAGAAG GTGCTCGAGT CGGCAATTGC CAACGCCGAG
CACAACGATG GCGCCGATAT CGACGAACTG AAGGTCAAGA CCATCTACGT CGAACAGGGC
GCAACGCTCA AGCGCTTCAC GGCGCGAGCC AAGGGTCGCG GTAACCGCAT CAGCAAGCCC
ACGTGCCATG TGTACGTGAC GGTTGGCAAC TAA
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| Protein sequence | MSETRAVLRG VRLSVDKGRL VADLIRGKKV DQALNVLQFT QKKAAVIIKK VLESAIANAE
HNDGADIDEL KVKTIYVEQG ATLKRFTARA KGRGNRISKP TCHVYVTVGN
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