| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4906 |
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| Symbol | rplP |
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| ID | 7971600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5218309 |
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| End bp | 5218725 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795501 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_002946776 |
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| Protein GI | 239817866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0575421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CTGCACGCAG AAAGTTCCGC AAGGAACAAA AGGGCCGCAA CACCGGCGTC
GCAACCCGGG GCAACTCGGT TGCCTTCGGT GACTTCGGTC TCAAATGCAC CGACCGCGGC
CGCCTCACGG CGCGCCAGAT CGAAGCCGCT CGCCGCGCGA TTTCGCGTCA CGTGAAGCGC
GGTGGCCGTA TCTGGATCCG CGTGTTCCCG GACAAGCCGA TCTCTACCAA GCCCGCCGAA
GTGCGGATGG GTAACGGTAA GGGCAACCCC GAGTACTACG TCGCTGAAAT CCAGCCTGGC
AAGATCGTGT TCGAGATCGT CGGCGTGCCC GAAGAACTCG CCCGCGAAGC GTTCCGCCTG
GCCGCCGCCA AGCTTCCGCT GCGTACGACC TTCGTCGCTC GCCAGCTCGG CGCCTGA
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| Protein sequence | MLQPARRKFR KEQKGRNTGV ATRGNSVAFG DFGLKCTDRG RLTARQIEAA RRAISRHVKR
GGRIWIRVFP DKPISTKPAE VRMGNGKGNP EYYVAEIQPG KIVFEIVGVP EELAREAFRL
AAAKLPLRTT FVARQLGA
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