| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4904 |
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| Symbol | rpsQ |
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| ID | 7971598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5217765 |
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| End bp | 5218034 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644795499 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_002946774 |
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| Protein GI | 239817864 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.049648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGAAG CTAAAAAATC CCTCAAGCGC ACCTTGATCG GCAAGGTGGT CAGCGACAAG
CGTGCCAAGA CCGTGACCGT GCTGGTCGAG CGCCGTGTGA AGCACGAGCT CTACGGCAAG
ATCGTGGCCA AGACGAGCAA GTACCACGCC CACGACGAAA AGGGCGAGTA CAAGCTGGGC
GACACCATCG AGATCACGGA AAGCCGTCCG ATCTCCAAGA CCAAGAACTG GGTCGTGACC
CGCCTGGTCG AGAAGGCCGT GCTGGTCTGA
|
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| Protein sequence | MTEAKKSLKR TLIGKVVSDK RAKTVTVLVE RRVKHELYGK IVAKTSKYHA HDEKGEYKLG
DTIEITESRP ISKTKNWVVT RLVEKAVLV
|
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