Gene Vapar_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4900 
Symbol 
ID7971594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5215232 
End bp5215774 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content74% 
IMG OID644795495 
Producthypothetical protein 
Protein accessionYP_002946770 
Protein GI239817860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCGT CCGACTCCCG TTTCCGGCCC GCGCTGGCCG CAGCCGCCAC GCTCGCGCTT 
GCCGCCTGCA GCCCCACCTT CAACTGGCGC GAGGTGCCGA TTGCCGACGA CGGCCTGGTC 
GTCCTCCTGC CCTGCAAGGC GGACCGCGCC GACCGCGCCT TGCCGCTCGG CGCCGAGTCG 
GTGCAGGTCG ACATGGCGGG CTGCGAGACC GGCGGTGCGA CCTTCGCGGT GGCCCATGCC 
TCGGCCGAGA GCCCGGCGCA GGCCGAGGCC TGGCTCCGGG CGTGGCGCGC TGCCACCCGC 
AGCCAGTTGG GCGAGGCGCA GATGACCGAA GCCCCTGCCG TACTGAAACG CGCGATCGCG 
GCGCCCGCGC CGGTGCGGCT CGATGCCCAG CCGCCGCAAA AGGGCGCCGC GCCGGTCCAG 
GTGCTCTGGT TCGCCCAGTC GAAGAAGAAC GGCGGTGTCG CGCTCTATCA GGCCACCGTG 
CTCGGCCGCC CCTCCGCGCC CGAGGCGGCG ACCACCTTCT TCGAGGGCCT GCGTCTCCCA 
TGA
 
Protein sequence
MPSSDSRFRP ALAAAATLAL AACSPTFNWR EVPIADDGLV VLLPCKADRA DRALPLGAES 
VQVDMAGCET GGATFAVAHA SAESPAQAEA WLRAWRAATR SQLGEAQMTE APAVLKRAIA 
APAPVRLDAQ PPQKGAAPVQ VLWFAQSKKN GGVALYQATV LGRPSAPEAA TTFFEGLRLP