| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4890 |
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| Symbol | |
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| ID | 7971584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5207436 |
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| End bp | 5208833 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795485 |
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| Product | histidine kinase |
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| Protein accession | YP_002946760 |
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| Protein GI | 239817850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGCA GGCGGCGGAG TTTGCGCGAG GCGCTGCACG GGATCGCATC GCGCCGCGCG
GAGCTGCACA GGCAATGGCA TGCGCAGTGG CACGAGAAGG TGCAGGGCAA GCGCCGCTGG
CGCCGCTCGC TGCGCATACG GCTGGTCATG ATGTTCGTGA TGCTGGCGCT GGTGATGGCG
GCGGTGTTCA TGGGCGGCAT GAAGAAGTCC TTTTCCACCG GCTGGGCCGA GGCCGCCAAG
CCGATGCTGG TCGACTATGC CGACCGGCTC GTCGCCGAGA TCGGCACGCC GCCCGACGTG
GCGCGCGCGC AGGCGCTGGT CGCTCGGCTG CCGATCACGA TCCGCATCAC CGGCCCCAAG
GTCAACTGGG ACTCCAACCC CGGCGGCAGC AACGGCCGCG GCGGCTGGAT GCACGACCGC
GACGAAGAAC CCTGGAACGA CAAGTGGTTC GTCCGCCCGA CGGCAGATGG CCACCGCGTC
ATCTTCGGCT GGTCGCCCAG GCTCTGGCAG CTCGCGCCGC GCATCGTCGG CTGGGCCACG
CTCTGCGCGC TGCTGCTGCT CGTGGTGCTG GGCTATGCCT ATGTCAGCCG GCTGCTGCGG
CCGCTGATCG ACATCCGCGA AGGCGCGCAG CGCTTCGGCC GCGGCGAGTT CACGCAGCCG
ATCCCGATCC GCCGCAACGA CGACCTGGGC GACCTCGCCG AGCACATCAA CACCATGGCC
GACGACATCC AGGCCATGCT CGATGCCAAG CGCGGGCTGC TGCTGGCGTT GAGCCACGAA
CTGCGCTCGC CGCTCACGCG CGCCCGGCTC AATGCCGAGC TGCTGCCGGC CACGCCCGAA
AGCCAGGCCG AGCGCGAGGC GCTGCTGCGC GACTTGAACG AGATGCGCGA CCTGATCAGC
GACCTGCTCG AGAGCGAGCG GCTCGCAAGC CCGCACGTGG CGCTGCAGCG CGAGCCGGTC
GACCTGGCGG CACTGGTGCG CGAAGTCGCG GCCGAGATGC CGGGCGCCCC GCAGGTGCAC
CTGGACCTGG CCGAGGGACT GCCGCCGCAC GCCGTCGACC GCATGCGCAT CCGCCTGCTG
GTACGCAACC TGCTGGACAA CGCCTTGCGC TACAGCACCG ATGCGCCCCG CCCGCCCTGC
GTGTCGCTGC GCGCCGTGGT CGACGGGCCG GCGCAGGGCG TGGAGATCGA GGTGCGCGAC
CACGGCCCCG GCGTCGACGA GGCCCAGCTC GAACGCCTGA CCGAGGCCTT CTACCGCACC
GACAGCGCGC GCGCACGCGC CACCGGCGGC GTCGGGCTGG GCATGTACCT TTGCCGGCTG
ATCGCCGAGG CGCACGGCGG CAGCCTCGCG GTGCACAACG CGAATCCGGG CCTGCGGATC
GTGGTTCGCC TGGCCTGA
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| Protein sequence | MRRRRRSLRE ALHGIASRRA ELHRQWHAQW HEKVQGKRRW RRSLRIRLVM MFVMLALVMA
AVFMGGMKKS FSTGWAEAAK PMLVDYADRL VAEIGTPPDV ARAQALVARL PITIRITGPK
VNWDSNPGGS NGRGGWMHDR DEEPWNDKWF VRPTADGHRV IFGWSPRLWQ LAPRIVGWAT
LCALLLLVVL GYAYVSRLLR PLIDIREGAQ RFGRGEFTQP IPIRRNDDLG DLAEHINTMA
DDIQAMLDAK RGLLLALSHE LRSPLTRARL NAELLPATPE SQAEREALLR DLNEMRDLIS
DLLESERLAS PHVALQREPV DLAALVREVA AEMPGAPQVH LDLAEGLPPH AVDRMRIRLL
VRNLLDNALR YSTDAPRPPC VSLRAVVDGP AQGVEIEVRD HGPGVDEAQL ERLTEAFYRT
DSARARATGG VGLGMYLCRL IAEAHGGSLA VHNANPGLRI VVRLA
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