| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4883 |
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| Symbol | |
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| ID | 7971577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5200472 |
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| End bp | 5201377 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795478 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946753 |
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| Protein GI | 239817843 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCG ATACCGGCCT CCTGCAAGCC TTCACCGCCG TCCACCGCGC CAATGGCTTC
ACGCGCGCCG CCGAGCAGCT GCACCTGACG CAATCGGCGG TCAGCCACCA GATCCGCCGG
CTCGAGGAAC TGGTCGGGCG CCCGCTGTTC CACCGCACCA CGCGGCGCCT GCGCCTGACC
GCCGACGGCG AAGACTTTCT TCGCCATGCC GAGCGCATCC TGCAGGCGCA GGACGCGCTG
GCGCGGCACT TCCGCTGCTC GCCGATCGAA GGCACGGTGC GCTTCGGCGT GCCCGAGAGC
TTCATGAGCG AGGGCCTGCC GCAGCTCCTG CAACAGTTCG CGCGCAGCTG CCCCAACGTG
AGGCTGGAGG TGAGCGTGGG CCTGACGCTC GACCTGGCGA CGATGGTGCG CGAGCGCGAG
CTCGACCTGG CGGTGGTGGT GTCGGTCTCG GGCGAGGTCG AGGGCACGCT GCTGCGGCGC
CTGCCGATGG TGTGGGCCGC GGCCGAGGGC TTCGAGCGCA CGGACGGCGC CTCGCTGCCG
CTGGCCTATT CGCCGCCGCC CTGCGTGTGC CGCCAGGTCA GCATCGATGC GCTGAACCAG
GCCGGCATTC CCTGGCACGG CGCCTTCAGC TCGCACAGCC TGCAGGACCT GCGCACGGCC
GCGCTGAGCG GCCTGGCCGT GGCCACCTTC ACGCGCGACA ACCTGCGCCC CGGCATGGCG
GTGCTGGACG AGCGCCATGG CCTGCCGGCG CTGCCGATGC TGGACTTCAC CTTGGCCTAC
GGCGAAGGCG ATGCGGGGGA GCGCAGCCCG GCCGTGGCCG AGCTCGGCCG ACTGATCGAG
CAGGCCGAGT GGGCGCACCG GGACAAGGCC GCGCGGCGGC CGCGCCGCAC GCTGCGCGCG
GCGTAG
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| Protein sequence | MNFDTGLLQA FTAVHRANGF TRAAEQLHLT QSAVSHQIRR LEELVGRPLF HRTTRRLRLT
ADGEDFLRHA ERILQAQDAL ARHFRCSPIE GTVRFGVPES FMSEGLPQLL QQFARSCPNV
RLEVSVGLTL DLATMVRERE LDLAVVVSVS GEVEGTLLRR LPMVWAAAEG FERTDGASLP
LAYSPPPCVC RQVSIDALNQ AGIPWHGAFS SHSLQDLRTA ALSGLAVATF TRDNLRPGMA
VLDERHGLPA LPMLDFTLAY GEGDAGERSP AVAELGRLIE QAEWAHRDKA ARRPRRTLRA
A
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