Gene Vapar_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4879 
Symbol 
ID7971573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5196765 
End bp5197079 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID644795474 
Productprotein of unknown function DUF493 
Protein accessionYP_002946749 
Protein GI239817839 
COG category[S] Function unknown 
COG ID[COG2921] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CCAACGAAAA GATCGAAACC GCCACCGTTC ACGTCCCCGA TCCGCGCAAG 
GAATCGCTGA TCGAGTACCC CTCGCAGTTT CCGATCAAGG TCATGGGCGT CAAGACCGAT
GGCTTCGTGC ACGCGATCAC TCAGATTGCC GAGCGCTTCG ATCCGGCCTT CGACGCCGCC
ACGGTCGAGC TGCGCGACAG CAAGGCGGGC AACTACCTGG GCGTGACGAT CACCGTCACC
GCCACCAGCC GCGAGCAGCT CGACGATCTC TACCGCGCGC TGTCGGCCCA TCCGATGGTC
AAGGTCGTTC TCTGA
 
Protein sequence
MTDTNEKIET ATVHVPDPRK ESLIEYPSQF PIKVMGVKTD GFVHAITQIA ERFDPAFDAA 
TVELRDSKAG NYLGVTITVT ATSREQLDDL YRALSAHPMV KVVL