Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4879 |
Symbol | |
ID | 7971573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5196765 |
End bp | 5197079 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644795474 |
Product | protein of unknown function DUF493 |
Protein accession | YP_002946749 |
Protein GI | 239817839 |
COG category | [S] Function unknown |
COG ID | [COG2921] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA CCAACGAAAA GATCGAAACC GCCACCGTTC ACGTCCCCGA TCCGCGCAAG GAATCGCTGA TCGAGTACCC CTCGCAGTTT CCGATCAAGG TCATGGGCGT CAAGACCGAT GGCTTCGTGC ACGCGATCAC TCAGATTGCC GAGCGCTTCG ATCCGGCCTT CGACGCCGCC ACGGTCGAGC TGCGCGACAG CAAGGCGGGC AACTACCTGG GCGTGACGAT CACCGTCACC GCCACCAGCC GCGAGCAGCT CGACGATCTC TACCGCGCGC TGTCGGCCCA TCCGATGGTC AAGGTCGTTC TCTGA
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Protein sequence | MTDTNEKIET ATVHVPDPRK ESLIEYPSQF PIKVMGVKTD GFVHAITQIA ERFDPAFDAA TVELRDSKAG NYLGVTITVT ATSREQLDDL YRALSAHPMV KVVL
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