Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4873 |
Symbol | |
ID | 7971567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5192952 |
End bp | 5193482 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644795468 |
Product | ATP synthase F1, delta subunit |
Protein accession | YP_002946743 |
Protein GI | 239817833 |
COG category | [C] Energy production and conversion |
COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAC TCGCCACCAT TGCACGCCCC TACGCCGAGG CGCTCTTCAA GGCCTCGTCG TCCGACGTTG CCGGCACCAG CGCCTGGCTC GAAAAGATGG CCGTCATCGC GGCCAGTCCG GAGCTCCAGC AGTTCGCCGA CAACCCCAAG GCCACGGCCG AGCAGGTTCT CGGCGTGGTC GCCGGCGCCT TCGGTGCGCC GCTGCCCGCC CATGCCCAGA ACTTCCTGGG TGCGCTCCTC GAGAACGGGC GCTTCTCGGT GCTGCCGGAA ATTGCGAAGC AGTTCCGGGC ACTGGCCAAC GCGAAGAGCG GTTCGTCCGA CGCCGTGGTC TACAGCGCCT TCCCGATCGA TGCGTCGGCC CTGGCCAATG TGGCGGCCGC GCTCGAAAAG CGCTTCGGCC GCAAGCTGCA GGTCACGGTC CAGCAAGAGC CGGAACTGAT CGGCGGCATT CGTGTGGTGG TCGGCGACGA GGTGCTCGAC ACCTCCGTCA AAGCGCGCCT TGAACAAATG AAAGTTGCGC TGGCGGCCTG A
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Protein sequence | MAELATIARP YAEALFKASS SDVAGTSAWL EKMAVIAASP ELQQFADNPK ATAEQVLGVV AGAFGAPLPA HAQNFLGALL ENGRFSVLPE IAKQFRALAN AKSGSSDAVV YSAFPIDASA LANVAAALEK RFGRKLQVTV QQEPELIGGI RVVVGDEVLD TSVKARLEQM KVALAA
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