| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4872 |
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| Symbol | |
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| ID | 7971566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5191350 |
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| End bp | 5192903 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795467 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_002946742 |
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| Protein GI | 239817832 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCA ATCCCGCAGA AATTTCCGAA CTGATCAAGA GCCGCATCGA GGGCCTCGGA
GTCAGCGCCA ACATCCGCAA CGAGGGCACC GTGGTTTCGG TGACCGACGG CATCGTGCGC
GTGCACGGCC TGTCCGACGC GATGCAGGGC GAAATGCTCG AGTTCCCGCC CACGGCCGAC
GGTACGCCGT CGTTCGGCCT CGCGCTGAAC CTCGAGCGCG ACTCGGTCGG CGCCGTGATC
CTGGGCGAGT ACGAGCACAT CTCCGAAGGC GACACCGTCA AGTGCACGGG CCGCATCCTG
GAAGTGCCCG TCGGCCCCGA ACTCATCGGC CGCGTGGTGA ACGCCCTGGG CCAGCCGATC
GACGGCAAGG GCCCCATCAA CGCCAAGATG ACCGACGTGA TCGAGAAGGT CGCACCGGGC
GTGATCGCCC GCAAGTCGGT CGACCAGCCG ATGCAGACCG GCCTCAAGTC GATCGACTCG
ATGGTGCCGA TCGGCCGTGG CCAGCGCGAG CTGATCATCG GCGACCGCCA GACCGGCAAG
ACCGCCGTGG CAATCGACGC GATCATCAAC CAGAAGGGTC AGAACATGAC CTGCGTCTAC
GTTGCGATCG GCCAGAAGGC TTCGTCGATC AAGAACGTGG TGCGCGCACT GGAACAAGCC
GGCGCGATGG ACTACACCAT CGTGGTGGCC GCATCGGCCT CCGAATCGGC CGCCATGCAG
TACGTGTCGG CCTACTCGGG CTGCACCATG GGCGAATACT TCCGCGACCG CGGCGAAGAC
GCGCTCATCG TCTATGACGA CCTCTCCAAG CAAGCCGTGG CCTACCGCCA GGTCTCGCTG
CTGCTGCGCC GCCCGCCAGG CCGCGAAGCC TACCCCGGCG ACGTGTTCTA TCTCCACAGC
CGCCTGCTCG AGCGCGCAGC CCGCGTGAAC GCCGACTACG TCGAAGCCTT CACCAAGGGT
GAAGTCAAGG GCAAGACCGG CTCGCTGACG GCACTGCCGA TCATCGAAAC GCAGGCCGGC
GACGTGTCCG CCTTCGTTCC GACCAACGTG ATCTCGATCA CCGACGGCCA GATCTTCCTG
GAAACCAACC TGTTCAACGC CGGTATCCGC CCCGCCATCA ACGCCGGTAT CTCGGTGTCG
CGCGTGGGTT CGTCGGCGCA GACCAAGGTC ATCAAGGGCC TGTCGGGCGG TATCCGTACC
GACCTGGCGC AGTACCGTGA GCTGGCTGCG TTCGCGCAGT TCGCCTCCGA CCTGGACGAA
GCCACCCGCA AGCAGCTCGA CCGCGGTGCC CGCGTGACCG AACTGCTGAA GCAGGCCCAG
TACAGCCCGC TGCCGATCTC GCTGATGGGC GCCACGCTGT TCGCGGTGAA CAAGGGCTTC
ATGGACGACC TCGAGATCAA GAAGGTGCTG CCGTTCGAAC ACGGCCTGCA CCAGTTCCTG
AAGTCCAGCC ATGCTGCGCT GCTCGACAAG ATCGAAAAGG CCAAGGCACT CGACAAGGAC
GCCGAGGCCG AGCTGACCGC CGCCATCACG TCGTTCAAGA AGTCGTTCGC CTGA
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| Protein sequence | MQLNPAEISE LIKSRIEGLG VSANIRNEGT VVSVTDGIVR VHGLSDAMQG EMLEFPPTAD
GTPSFGLALN LERDSVGAVI LGEYEHISEG DTVKCTGRIL EVPVGPELIG RVVNALGQPI
DGKGPINAKM TDVIEKVAPG VIARKSVDQP MQTGLKSIDS MVPIGRGQRE LIIGDRQTGK
TAVAIDAIIN QKGQNMTCVY VAIGQKASSI KNVVRALEQA GAMDYTIVVA ASASESAAMQ
YVSAYSGCTM GEYFRDRGED ALIVYDDLSK QAVAYRQVSL LLRRPPGREA YPGDVFYLHS
RLLERAARVN ADYVEAFTKG EVKGKTGSLT ALPIIETQAG DVSAFVPTNV ISITDGQIFL
ETNLFNAGIR PAINAGISVS RVGSSAQTKV IKGLSGGIRT DLAQYRELAA FAQFASDLDE
ATRKQLDRGA RVTELLKQAQ YSPLPISLMG ATLFAVNKGF MDDLEIKKVL PFEHGLHQFL
KSSHAALLDK IEKAKALDKD AEAELTAAIT SFKKSFA
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