Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4867 |
Symbol | |
ID | 7971561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5186609 |
End bp | 5187778 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795462 |
Product | ROK family protein |
Protein accession | YP_002946737 |
Protein GI | 239817827 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTTGC TGGAGACCAC CTTCTGGTCG GCCGGCGGCT CGCGCCATGC CATGGCCGAA CAGCTCGGCT TCTCCAAGAG CAAGGCCAAT GCGCTGATCG CCGGCCTGGT CGAACAGGGC CTCTTGGCCG AAGCGGGCCT GCAGCGCTCG TCGGGCGGGC GCCGCGCCGA GAACCTGCAG CTGCATGCCG GGCTTGGCGT GCTCGTGGGC ATCGACATCG GCGCCACCAG CCTCGACGTT GCGGTGCTGC GGCCCGATCT CAGCGTGCTC GCGCAGCACG ACGAGCCGGC CGATGTGCGC GAAGGCCCGG CCGTGGTGCT GGCGCGGGTG CGCGTGCTGA TGCGCGAACT GCTCGCGCGC TGCGGCCACG GCCCGAAGAA CGTGCTGGGC ATCGGCATCG GCGTGCCCGG CCCGGTCAAC TTCGAGATCG GCCAGCTCGT GAATCCGCCG CTGATGCCGG CCTGGGACAG CTTCTCGATC CGCGACTACC TGCGCGAGGA CTACGCGGCG CCCGTCTTCG TCGACAACGA CGTGAACCTG ATGGCGCTCG GCGAACTGTG GCGGCTGAAG CGCTCGCTCA ACAACTTCCT CGTGATCAAG ATCGGCACCG GCATCGGCTG CGGCATCGTC TGCCATGGCG AGGTCTATCG CGGCGCGGCC GGGTCGGCCG GCGACGTGGG CCATATCTGC GTCGACCAGG ACGGGCCGCG CTGCCATTGC GGCAACGTCG GCTGCGTCGA GGCCATGGCC GCGGGGCCGG CTATCACGCG CATGGCGGTG CAGGCGGCCG AGGCTGGTGA AAGCGCCATG CTGGCCGAGT GCCTGCGCGT GCACGGGCGC ATCGATGCCA TCGACGTGGG CCAGGCGAGC CGCGCCGGCG ATACCGCGGC CAACGGCATC ATCCAGCGCG CCGGCAACCT CATCGGCCAG ATGCTGGCGT CGGTGGTGAA CTTCTTCAAT CCCTCGCATG TGTTCATCGG CGGCGGCATC ACGCGCATCG GGCCGCTGTT CCTGGCGGCC GTGCGGCAGA GCGTGTACCA GCGCTCGCTC GCGCTCTCGA CGCGGCACCT GGAAATCCAG TACACGCCGC TGGGCGTGCA GGGCGGCCTG GTGGGTGCCG GCGTGCTCGC GATGCACGAG ACACTGAAGG TCCGCGGAGT GGCGCCATGA
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Protein sequence | MRLLETTFWS AGGSRHAMAE QLGFSKSKAN ALIAGLVEQG LLAEAGLQRS SGGRRAENLQ LHAGLGVLVG IDIGATSLDV AVLRPDLSVL AQHDEPADVR EGPAVVLARV RVLMRELLAR CGHGPKNVLG IGIGVPGPVN FEIGQLVNPP LMPAWDSFSI RDYLREDYAA PVFVDNDVNL MALGELWRLK RSLNNFLVIK IGTGIGCGIV CHGEVYRGAA GSAGDVGHIC VDQDGPRCHC GNVGCVEAMA AGPAITRMAV QAAEAGESAM LAECLRVHGR IDAIDVGQAS RAGDTAANGI IQRAGNLIGQ MLASVVNFFN PSHVFIGGGI TRIGPLFLAA VRQSVYQRSL ALSTRHLEIQ YTPLGVQGGL VGAGVLAMHE TLKVRGVAP
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