| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4865 |
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| Symbol | |
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| ID | 7971559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5184083 |
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| End bp | 5185084 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795460 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946735 |
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| Protein GI | 239817825 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAGC CTGAAGCCGC GCAACACCGC AGCGAGGGCA AGCCGCGCTG GACCGAGCAC
CTGCACGGGC TCGGCCCGGT CATCGGCCTG GTGCTGCTGT GCATCGGCGG CACGCTGCTC
AACAGCGACT TCGCGACCGT CGACAACGCG ATGAACGTGC TCACGCGCAC GGCCTTCATC
GGCATCATCG CGGTGGGCAT GTGCTTCGTG ATCATCTCGG GCGGCATCGA CCTGTCGGTG
GGCTCGATGG CGGCACTCAT TGCCGGCAGC GTGATCATGT TCATCAACTG GGCCGGTCCG
GCCTCGGGCT CGCCATTGAT GGCGGTGGTG ATGGGCGCGG TGCTCGCGGT GGTGCTGGGC
GCGCTGTTCG GCCTGGCGCA CGGGCTCCTG ATCACCAAGG GGCGCATCGA GCCCTTCATC
GTCACGCTGG GCACGCTCGG CATCTTCCGC GCCTACCTCA CGTACTTTGC CGACGGCGGC
GCGCTCACGC TCGACAACGA CCTGTCGGAC CTCTATGCGC CGGTGTACTA CGCAAGCCTG
GCGGGCATTC CGGTGCCGGT GTGGGTGTTC GTGATCGTCG CGATCATCGG CGGCGTCATC
TTGAACCGCA CGGCCTACGG GCGCTATGTG CAGGCCATCG GCTCCAACGA GCAGGTCGCG
CGCTATGCGG CGGTGGACGT GGACCGCGTG AAGATCCTTA CCTACGTGCT GCTGGGCGTG
TGCGTGGGCA TTGCCACGCT GCTGTACGTG CCGCGCCTGG GCTCCGCATC GCCGACCACG
GGCCTCTTGT GGGAGCTCGA GGCGATTGCC GCGGTGATCG TCGGCGGCAC CGCGCTCAAG
GGCGGCGCGG GCAGCATCAC GGGCACCGTG GTGGGCGCCA TCCTGCTCTC GGTCATCAGC
AACATCCTGA ACCTCACCAG CATCATCAGC GTGTACCTCA ACGCCGCGGT GCAGGGCTTC
GTGATCATCA TCGTCGCGTT CCTGCAAAGA GGGCGCCGCT AG
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| Protein sequence | MPQPEAAQHR SEGKPRWTEH LHGLGPVIGL VLLCIGGTLL NSDFATVDNA MNVLTRTAFI
GIIAVGMCFV IISGGIDLSV GSMAALIAGS VIMFINWAGP ASGSPLMAVV MGAVLAVVLG
ALFGLAHGLL ITKGRIEPFI VTLGTLGIFR AYLTYFADGG ALTLDNDLSD LYAPVYYASL
AGIPVPVWVF VIVAIIGGVI LNRTAYGRYV QAIGSNEQVA RYAAVDVDRV KILTYVLLGV
CVGIATLLYV PRLGSASPTT GLLWELEAIA AVIVGGTALK GGAGSITGTV VGAILLSVIS
NILNLTSIIS VYLNAAVQGF VIIIVAFLQR GRR
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