| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4855 |
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| Symbol | |
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| ID | 7971549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5172728 |
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| End bp | 5173252 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795450 |
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| Product | protein of unknown function DUF477 |
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| Protein accession | YP_002946725 |
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| Protein GI | 239817815 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3762] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.198314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGG CAACGCTTTT CTCGAAGCTG GCCCGCATCT GGCGCCACCA GTGGATGGAC
GAGGCCGATG TGCGGCGCGT GCTGCCCGAT GCCGCCATGG AGCGCCTGGC GGCACGCGTG
GCCGCGAGCG AGCGCCGCCA CAGCGGCGAG ATCCGCATCT GCGTCGAAGC GGGCCTGCCA
TGGTCCTACC TGCGGCGCCA TGCCTCGGCG CGCGAGCGTG CCGTCACGCT GTTCGGCAAG
CTGCGCGTGT GGGACACCGC GCACAACAAC GGCGTGCTCA TCTACCTGCT GCTGGCCGAG
CATGCGATCG AGATCGTGGC CGACCGCGGC ATCGATGCGC ACGTCGACGA TGCCGAATGG
GCCGCGATGG CGCAGCGCAT GGGTGCGGCC TTCCGCGAGG GCCGCTTCGA GGACGGGCTC
ACGCAGGCGC TGGAAGAAAT GTCGGCCTTG CTGGTGGCGC ACTTTCCGCT GGCCGAGAAC
GAGCCCGACA CCAACGAGTT GCCCGACGAG CCCGTCGTCC TTTGA
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| Protein sequence | MATATLFSKL ARIWRHQWMD EADVRRVLPD AAMERLAARV AASERRHSGE IRICVEAGLP
WSYLRRHASA RERAVTLFGK LRVWDTAHNN GVLIYLLLAE HAIEIVADRG IDAHVDDAEW
AAMAQRMGAA FREGRFEDGL TQALEEMSAL LVAHFPLAEN EPDTNELPDE PVVL
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