| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4850 |
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| Symbol | |
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| ID | 7971544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5168742 |
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| End bp | 5169674 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795445 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946720 |
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| Protein GI | 239817810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG GCATCGTTCT CAACTGGCTC GCGAGCACGC CCGACTTCGC GGTGCCCTAT
GCGCTCGCGG CGCTGGGCCT GATCATCAGC GAGCGCGCGG GCGTGCTGTC GCTCGGTGCC
GAAGGGCTGA TGTTGGTCGG CGCGCTCGCG GGCATCGGCG CGCAGATCGC CATGGGACAG
CCGGCCGTGT CGCTGGTGCT GGCGATGCTC GCGGCCAGTG CGGTGTCGCT GCTGTTCGCG
GTGATGGTGA TCTGGCTGCG CGTGAACCAG GTGATCGCGG GGCTCGCGCT GGTGTTCTTC
TGCCAGGGCC TCACGGCGCT GGTCGGCTCG CTGGCCGAAT GGACCAACCA TGCCACCGGA
GGCATCGGCG CGATGGCGCT GTGGCCGCTG TCGCTCCTGC CCGGCGCCGG CCGGCTGTTC
GAGCAGAACG CGATGGTCTG GCTCACGCTG CCGATCTTCC TTGCCGTGGC GTGGTTTCTC
TCGCGCAGCT CGGCCGGGCT CCGGCTGCGG GCGGTGGGCG AGAACCCGCA GGCGGCGGAT
GCGGCCGGCA TCCGCGTTGC CCTGTGGCGG CTGGCCGCGG TGCTCGCGGG CTCGGCGCTG
GTGGGCCTTG CGGGCGCCTA CATCTCGGTG GTCAGCACCA AGCTGTGGAT CGCGGGCATG
ACCGGCGGGC GCGGCTGGAT CGCGGTGGGG CTGGTGATCT TCGCGCGATG GTCGCCGTGG
AAGGCGCTCG TGGGCGCGCT GCTGTTCGGC TGCATCGAGG CGCTGATCCC GCAGCTCGCG
GCGGCCGGCG TGCAGCTGCC GCAGTACTTC GTGATGATGA CGCCCTATGC GGTGACGCTC
GGGGTGATGG TGTGGGTCGC GCTCTCGCGG CGCGGCGCCG ACGAAGAGCC CGGTGCGCTG
GGCCAACCCT ATGTGCGGGA AGAGCGCCGA TGA
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| Protein sequence | MSGGIVLNWL ASTPDFAVPY ALAALGLIIS ERAGVLSLGA EGLMLVGALA GIGAQIAMGQ
PAVSLVLAML AASAVSLLFA VMVIWLRVNQ VIAGLALVFF CQGLTALVGS LAEWTNHATG
GIGAMALWPL SLLPGAGRLF EQNAMVWLTL PIFLAVAWFL SRSSAGLRLR AVGENPQAAD
AAGIRVALWR LAAVLAGSAL VGLAGAYISV VSTKLWIAGM TGGRGWIAVG LVIFARWSPW
KALVGALLFG CIEALIPQLA AAGVQLPQYF VMMTPYAVTL GVMVWVALSR RGADEEPGAL
GQPYVREERR
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