Gene Vapar_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4842 
Symbol 
ID7971536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp5160818 
End bp5161417 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID644795437 
Producthypothetical protein 
Protein accessionYP_002946712 
Protein GI239817802 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA TGAAACCCGC CCTCGACGAC GCCGCACTGG CCCTTCTTTT TACCGAGGCG 
CGCAGCCACA ACGGCTGGAC CGACGAGCCC GTGACCGATG CGCAGATCCG CCAGGTCTAC 
GCGCTGGCCT GCATGGGACC GACCTCGGCC AACTGCTCGC CCGCGCGCTT CGTGTTCGTT 
CGCACGCCCG AAGGCAAGCA GCGCCTCGCG CCGGCGCTTT CGAAGGGCAA CCTCAACAAG 
ACCATGGCTG CGCCCGTCAC CGTGATTGCC GCGTGGGACC GCAAGTTCTA CGACAAGCTG 
CCCACGCTGT TTCCGCATGC CGATGCGCGC AGCTGGTTCA CCGGCAGCCC CGAGGCCGCG 
CATGAAACCG CCTTTCGCAA CGCCAGCCTG CAGGCGGCCT ACCTGCTGCT GGCCGCGCGC 
GCGGTGGGGC TCGACGCCGG GCCGATGTCG GGCTTCGACA AGGCGAAGGT CGATGCCGCG 
TTCTTCGAGG GCACCGACTG GAGCGCCAAC TTCCTGATCA ACCTCGGCCA TGGCGATTCG 
GCCAAGGTGT TCGGGCGCCT GCCGCGGCTC GGCTTCGACG AAGCCTGCGT CCTCGCCTGA
 
Protein sequence
MTMMKPALDD AALALLFTEA RSHNGWTDEP VTDAQIRQVY ALACMGPTSA NCSPARFVFV 
RTPEGKQRLA PALSKGNLNK TMAAPVTVIA AWDRKFYDKL PTLFPHADAR SWFTGSPEAA 
HETAFRNASL QAAYLLLAAR AVGLDAGPMS GFDKAKVDAA FFEGTDWSAN FLINLGHGDS 
AKVFGRLPRL GFDEACVLA