| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4828 |
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| Symbol | |
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| ID | 7970298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5145930 |
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| End bp | 5146451 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795423 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002946699 |
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| Protein GI | 239817789 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0464638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG AGGTGTCTGG CGGCGAACTG GCCAAGACCT CGGGGATTTC TGCCTCGATG
CTTTCTCGGA TCGAGCGCGG GCTGGTCTCG CCTTCGGTGG AGACCCTGGA GCGCCTCGCG
CAGGGCCTGC ATGTGCCGAC CTCACGCTTC TTCAGTGATC AGGCACGGCG CACTGACTTT
TGCCATGTGC GTGCAGGACA TGGTGTCTTG GTCGATCGCA TCGGCGCCGT GGCGGACTAC
CGCTACGAGC TGCTGGGCCA CCTGCTGTCG GGCAACCTGT TCGTCGAGCC CTACCTGGTC
ACATTGCTGC CCGGCGCCGA TCCCTATGTG ACCTTCCAGC ATCCAGGCCT CAAGTTCCTG
TACTTCCTGT CCGGGGAGGT CAGCTACCGC TACGGCGGCA AGTCGGTGGC GGTAGGGGCG
GGGGACTCGC TGCTGTTCGA TGCGACCGCA CTGCACGGGA TTGAGACGAT CCAAGTGCAG
CCGGTGTCCT ACTTGTCGGT GGTGTTCACG CTGCGCGAGT GA
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| Protein sequence | MAAEVSGGEL AKTSGISASM LSRIERGLVS PSVETLERLA QGLHVPTSRF FSDQARRTDF
CHVRAGHGVL VDRIGAVADY RYELLGHLLS GNLFVEPYLV TLLPGADPYV TFQHPGLKFL
YFLSGEVSYR YGGKSVAVGA GDSLLFDATA LHGIETIQVQ PVSYLSVVFT LRE
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