| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4816 |
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| Symbol | |
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| ID | 7970286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5135260 |
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| End bp | 5136036 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795411 |
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| Product | transport-associated |
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| Protein accession | YP_002946687 |
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| Protein GI | 239817777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAA CGACACCGTT CCAGCGCTTC GCCATTGCAC TTGCCTCGGG AACCGTCCTG
GTTGCCGGGC TTTCGGCCTG CGTGCCGCTC GTGGTCGGAG GGGCCGCGGC GGTGGGCGTG
GGCATGGTGG CCACCGACCG CCGCAGCTCC GGCGCCCAGC TCGACGACCA GGGCATCGAG
CTGCGCGCAG CGGCCCGCGT GCGCGAGATC GCCAACGACA ACATGTACGT GAGCGTCACC
AGCTTCAACC GCCAGGTGCT GCTGACCGGC GCCGTGGGCA GCGACGCCGA CCGCCGCCGC
GTCGAGGACC TGGTGCAGCG CGTGGACAAC GTGCGCTCGG TGGTCAACGA GCTCACCGTC
GGCCCGCCCA GCACCTTCCA GGACCGCTCG AACGACCTGT TCATCAGCGG CAAGGTCAAG
GCCTCGCTGC TCGACGCCAA GGACATCTTC GCCAACTCGT TCAAGGTGGT GACCGAGCGC
GGCGTGGTCT ACCTGATGGG CATTGCGACG CGCCGCGAGA CCGACCGCGC GACCGAAATC
GCACGCGGCA TCTCGGGCGT GCAGAAGGTG GTGCGCGTGG TCGAGGTGGT GAGCGAAGCC
GAGCTGGCCA GCCAGGCGCA GCAGGCGCAG CGGGGCGGCA CCGGATCGCC TGCACCGGCA
CCCGCGCCGT CGTCGGCGCC CGGGTCTTCT TCGTCGTCGT CGCGCGTGCC GCTGCCGCCG
ATGGAGCCGC TGCCGCCGGC CCAGCCCGGC GGCGCCACGG CCACGCCGGT GCGCTGA
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| Protein sequence | MTTTTPFQRF AIALASGTVL VAGLSACVPL VVGGAAAVGV GMVATDRRSS GAQLDDQGIE
LRAAARVREI ANDNMYVSVT SFNRQVLLTG AVGSDADRRR VEDLVQRVDN VRSVVNELTV
GPPSTFQDRS NDLFISGKVK ASLLDAKDIF ANSFKVVTER GVVYLMGIAT RRETDRATEI
ARGISGVQKV VRVVEVVSEA ELASQAQQAQ RGGTGSPAPA PAPSSAPGSS SSSSRVPLPP
MEPLPPAQPG GATATPVR
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