| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4815 |
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| Symbol | |
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| ID | 7970285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5134306 |
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| End bp | 5135214 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795410 |
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| Product | 2-hydroxy-3-oxopropionate reductase |
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| Protein accession | YP_002946686 |
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| Protein GI | 239817776 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA TCAATCCCCG AACCTACGAA TCCACTCCCT CCCAGACGGT GGCCTTCCTG
GGCCTTGGCG TCATGGGCGG CCCGATGGCC GGGCACCTGG CCAAGGCCGG CCACAAGGTC
ACGGTCTACA ACCGCACGCC GGCCAAGGCC GAGGCCTGGG TCGCCGAATT CGGCGCGCCC
GGCCGCCATG CCGCCACCCC GCGCGAAGCG GCCGCAGGCG CCGACATCGT CTTCAGCTGC
GTGGGCAACG ACGACGACCT GCGCGCCGTG GTGCTGGGCC CGAACGGCGC CTTTGCCGGC
ATGAAGAAAG GCAGCGTGCT GGTCGACCAC ACCACCGCCT CGGCCGACGT GGCGCGCGAG
CTCGCGAACG CGGCGGCGGC AGCCGGCCTG CAGTTCATCG ACGCGCCGGT GTCCGGCGGC
CAGGCCGGCG CGCAGAACGG CGCGCTCACC GTGATGTGCG GCGGCGACAA GGCGAGCTTC
GAGCGCGTCA AGCCGGTGAT GGAGGCCTTC GCGCGCGCCG TCACGCTGCT GGGCGCGAGC
GGCGCCGGCC AGCTCGCCAA GATGGTGAAC CAGATCGCCA TCGCGGGCCT GGTGCAGGGC
CTGTCCGAAG CCATTGCCTT CGGCCAGCGC GCGGGCTTGG ACATGAAGCT GGTGCTCGAG
GTGATCGGCA AGGGCGCCGC CCAGAGCTGG CAGATGGACA ACCGCGGCAA GACCATGATC
GACGGCAAGT TCGACTACGG CTTTGCGGTC GACTGGATGC GCAAGGACCT GGGCCTGGTG
CTCGACGAGG CCAAGCGCAA CGGCGCGCGC GTGCCCGTGA CGGCGCTGGT CGACCAGTTC
TACGCCGACG TGCAGCAGGC CGGCGGGCGG CGCTGGGACA CGTCGAGCCT GATCATCCGG
CTCAAGTAA
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| Protein sequence | MSSINPRTYE STPSQTVAFL GLGVMGGPMA GHLAKAGHKV TVYNRTPAKA EAWVAEFGAP
GRHAATPREA AAGADIVFSC VGNDDDLRAV VLGPNGAFAG MKKGSVLVDH TTASADVARE
LANAAAAAGL QFIDAPVSGG QAGAQNGALT VMCGGDKASF ERVKPVMEAF ARAVTLLGAS
GAGQLAKMVN QIAIAGLVQG LSEAIAFGQR AGLDMKLVLE VIGKGAAQSW QMDNRGKTMI
DGKFDYGFAV DWMRKDLGLV LDEAKRNGAR VPVTALVDQF YADVQQAGGR RWDTSSLIIR
LK
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